Orcinus orca (killer whale): 101280477
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Entry
101280477 CDS
T05247
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X5
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
101280477 (PRDM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101280477 (PRDM4)
Transcription factors [BR:
oor03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101280477 (PRDM4)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
Zn_ribbon_PRDM4
zf-C2H2
zf-C2H2_4
SET
zf-H2C2_2
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
101280477
NCBI-ProteinID:
XP_033283439
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All DBs
Position
11:complement(88296668..88323294)
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AA seq
665 aa
AA seq
DB search
MHHRMNEMNLSPVGMEQLTSSSVSNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRP
PPQYIHPNSINVDGNTALSITNNPSALDPYQSNGNVGLEPGIVSIDSRSVNTHGAQSLHP
TDGHEVALDTTITMENVSRVTSPISTDGMAEELTMDGVAGEHTQIPNGSRSHEPLSVDSV
SNNLAAETVGHGGVIPIHGNGLELPVVMETDHIASRVNGMSDSALSDSIHTVAMSTNSVS
VALSTSHNLASLESVSLHEVGLSLEPVAVSSITQEVAMGTGHVDVSSDSLSFVPPSLQME
DSNSNKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSI
VGADVVPVLPLIGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHSGVLE
FCIITTDENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYA
QQIGVPEHPDVHLCNCGKECSSYTEFKAHLTSHIHNHLPSQGHSSSHGPSHSKERKWKCS
MCPQAFISPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTVCLFILRMLVAV
LFMVW
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacaggatgaatgaaatgaacctgagcccagtggggatggagcagctgacttca
tcctctgtgagcaatgccttgccagtctcagggagtcacctggggttggctgcctcaccc
actcacaatgccatcccagccccagggctgccagtggcgattccaaacctgggtccctcc
ctgagctctctgccttctgctttgtctctcatgctcccaatgggtattggggatcgaggg
gtgatgtgtgggttacctgaaagaaactacaccctacctccaccaccttacccccacctt
gagagcagttacttcagaaccattctacctggcattttatcttatttagctgacagacca
cctcctcagtatatccaccctaactctataaatgttgatggtaatacagcattatctatc
accaataacccttcggcgctagatccctatcagtccaatggaaatgttggattagaacca
ggcattgtttcaatagactctcgctctgtgaacacacatggtgcccaaagtcttcatccc
actgatggccatgaggtggccttggacacaacaatcactatggagaacgtctctagggtc
accagcccaatctctacagatggaatggcagaagagcttaccatggatggtgttgcaggc
gagcatacccaaatcccaaatggctccagaagtcatgaacctctgtctgtggattctgtg
agcaacaaccttgcagcagaaactgtaggacatggtggtgtgatacccattcatgggaat
ggcctggagctccctgtggtcatggagacagaccacattgcaagtcgggtcaacggaatg
tctgacagtgccctcagtgactccatccacaccgtggccatgagcaccaactctgtaagc
gtggcactctctacctcacacaacctcgcctccctagaatctgtttccctccatgaagtt
ggcctaagcctagaacctgtggctgtctcctccatcacccaggaggttgctatggggaca
ggtcatgtagatgtgtcttcagacagtctttcttttgtaccaccttcactgcaaatggaa
gactccaattcaaacaaggaaaatatggcaaccttgtttacaatttggtgcactctctgt
gaccgagcctatccctcagactgcccagatcacggaccggtgacttttgttcctgacact
ccaatagagagcagagcgaggctttctctcccaaagcagcttgttctccgccagtcaatt
gtgggagcagatgttgttcctgtccttccactgataggtgtatggactggagaaaccatt
cctgtgcggacttgctttgggcctcttattggccagcaaagtcactccatggaagtagca
gaatggacagacaaggcagttaatcatatctggaagatataccacagtggtgtcctagaa
ttctgcatcattacaactgacgaaaatgaatgtaattggatgatgtttgtgcgcaaagcc
aggaatcgggaagagcagaatttggtggcttatccccatgatggaaaaatctatttctgc
acctcacaagatatccctcctgaaaatgaactgcttttttattacagccgggattatgct
cagcagattggtgttcctgaacacccagatgtgcacctctgtaactgtggcaaggagtgc
agttcctatacagagttcaaagcccacctgaccagccacatccataaccatcttcctagc
cagggccacagcagcagccatgggccaagccacagcaaagaaaggaagtggaagtgctcc
atgtgcccccaagcttttatctctccttccaaacttcatgttcactttatgggtcacatg
ggtatgaagccccacaagtgtgatttctgtagcaaggcttttagtgatcccagcaacctg
cggacccacctcaagatacatacagtgtgcctcttcatcctgagaatgctcgtggcagtt
ttattcatggtgtggtaa
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