Orcinus orca (killer whale): 101280514
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Entry
101280514 CDS
T05247
Symbol
SLC6A13
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04082
Neuroactive ligand signaling
oor04721
Synaptic vesicle cycle
oor04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
101280514 (SLC6A13)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
101280514 (SLC6A13)
04721 Synaptic vesicle cycle
101280514 (SLC6A13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oor02000
]
101280514 (SLC6A13)
Transporters [BR:
oor02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101280514 (SLC6A13)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
101280514
NCBI-ProteinID:
XP_004279176
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Position
11:3259690..3295923
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AA seq
597 aa
AA seq
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MDSRVSSTTSNGETKPVCPGMEKAEEAGGLQRGHWNNKMEFVLSVAGEIIGLGNVWRFPY
LCYKNGGGAFFIPYLIFLFTCGIPVFLLETALGQYTSQGGITAWRKICPIFEGIGYASQT
IVILLNIYYIIVLAWALFYLFSSFTIDLPWGSCRHDWNTEHCVEFQRASSSVNVSSENAT
SPVIEFWERRVLKISDGIQHLGALRWELALCLLLAWVICYFCIWKGVKSTGKVVYFTATF
PYLMLVVLLIRGVTLPGAAQGIQFYLYPNLTRLWDPQVWMDAGTQIFFSFAICLGCLTAL
GSYNKYHNNCYRDCIALCFLNSGTSFVAGFAIFSILGFMSQEQGVPISEVAESGPGLAFI
AYPRAVVMLPFSPLWACCFFFMVVLLGLDSQFVCVESLVTALVDMYPGVFRKKNRREVLI
LGVSVTSFLVGLVMLTEGGMYVFQLFDYYAASGTCLLFVAIFESLCVAWAYGAGRFYDNI
EDMIGYRPWPLIKYCWLFLTPAVCTATFLSSLIKYTPLTYNKKYLYPWWGDALGWLLALS
SMICIPAWSCYKLSTLKGSFRERVRQLMCPAEDLPQWAQAEPSAPATPRTLELESHC
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggatagcagggtctcgagcacaaccagtaatggagagacaaaaccagtgtgcccaggc
atggaaaaggcggaggaggctggcggcctgcagcgggggcactggaacaacaagatggag
ttcgtgctgtccgtggccggggagatcatcgggctgggcaacgtctggaggtttccctac
ctctgctacaaaaacgggggaggtgcctttttcatcccctacctcatcttcctctttacc
tgtggcattcctgtctttctcctggagacagcactaggccagtacaccagccaggggggc
atcacagcctggaggaagatctgccccatctttgagggtatcggctatgcctcccagacc
attgtcatcctcctcaacatctactacatcatcgtcctggcctgggccctcttctacctc
ttcagcagcttcaccatcgacctgccctgggggagctgccgccacgactggaacacagag
cactgcgtggagttccagagggccagcagctccgtgaacgtgagctctgagaacgccacc
tctcccgtaatcgagttctgggagaggcgggtcctgaagatctcggacggcatccagcac
ctgggggccctgcgctgggagctggccctgtgcctcctgcttgcctgggtcatctgctac
ttctgcatctggaagggggtcaagtccacgggcaaggtggtgtacttcacagccaccttc
ccttacctcatgctggtggtcctgttgattcgaggggtgacgctgcctggggccgcccaa
ggaattcagttttacctgtacccaaacctcacgcgtctgtgggacccccaggtgtggatg
gacgcaggcacccagatcttcttctccttcgccatctgcctagggtgcctgacggccctg
ggcagctacaacaagtaccacaacaactgctacagggactgcatcgccctctgcttcctc
aacagcggcaccagcttcgtggccgggtttgccatcttctccatcctgggcttcatgtcc
caggagcagggggtgcccatctctgaggtggccgagtcaggccctggtctggctttcatc
gcctacccccgggctgtggtgatgctgcctttctcgcccctctgggcctgctgcttcttc
ttcatggtcgtccttctgggactggatagccagttcgtgtgcgtggaaagcctggtgacg
gcgctggtggacatgtaccccggtgtattccgcaagaagaaccggagggaggtcctcatc
ctgggggtgtctgtcacctccttcctcgtcgggctcgtcatgctcacagagggcggtatg
tacgtgtttcagctctttgactactacgcagccagtggcacgtgcctcctgttcgtggcc
atctttgagtccctctgtgtggcgtgggcctatggtgccgggcgcttctatgacaacatt
gaagacatgattgggtacaggccgtggccccttatcaaatactgttggctcttcctcaca
ccggctgtgtgcacagccaccttcctgtcctccctgatcaagtacaccccactgacctac
aacaagaagtacctgtacccgtggtggggcgatgccctgggctggctcctggctctctcc
tccatgatctgcattcccgcctggagctgctacaaactcagcaccctcaagggctctttc
agagagagagttcgccagctcatgtgcccagctgaggacctgccccagtgggcccaagcg
gaaccctctgccccggccacgcccaggacgttggaactggagtctcactgctag
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