Orcinus orca (killer whale): 101280608
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Entry
101280608 CDS
T05247
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X4
KO
K06757
neurofascin
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04514
Cell adhesion molecule (CAM) interaction
oor04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
101280608 (NFASC)
04517 IgSF CAM signaling
101280608 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oor04515
]
101280608 (NFASC)
Cell adhesion molecules [BR:
oor04515
]
Immunoglobulin superfamily
L1 family
101280608 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Ig_PDGFR_d4
V-set_CD47
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
101280608
NCBI-ProteinID:
XP_033266328
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All DBs
Position
1:34823857..35013017
Genome browser
AA seq
1359 aa
AA seq
DB search
MARQQPPPWVHTAFLFCLLSLSGAIEIPMDPSIQNELSQPPTITKQSVKEHIVDPRDNIL
IECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFA
RNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM
EPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFNLKVLTNHPYN
DSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKK
GGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEP
KNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSR
AVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLR
WFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTR
IYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVYWLKDDEPLYVGNRMKKEEDSLTIFGVA
ERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERS
VRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKFPGSVNSAILQLSPYVNYQFRVI
AINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRY
IVKWRRRETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGED
YPRAAPTDVKIRVLNSTAISLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQ
AGFPGDRLRGVVSRLFPYSNYKLEMAVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQP
NLETINLEWDHPEHPNGILTGYTLKYVAFNGTKVGKQIVENFSPNQTKFTMQRADPVSRY
RFSLSARTQVGSGEAVTEESPAPPNEAAPTAAPPTLPPTTVGVTGTVGSTDATAATTEAT
TVPTIPTVAPSTVATTTVATTTTTTAAATTTESPPTTTRTEIQESAPDEQSIWNVTVLPN
SKWANITWKHNFGPGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLYPGMTYTLRVYSRD
NEGISSTVITFMTSTAYTNNQADIATQGWFIGLMCAVALLVLTLLIVCFIKRSRGGKYPV
REKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQ
FNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcagcagccaccgccctgggtccacacagccttcctcttctgcctgctcagc
ctcagcggggccatcgagattcccatggatccaagcattcagaatgagctgtcccagccc
ccaaccatcaccaagcagtcagtgaaggagcacatcgtggatccccgcgataacatcttg
attgagtgcgaagcaaaagggaaccctgcccccagcttccactggactcgcaacagtagg
ttcttcaacatcgccaaggacccccgggtgtcgatgaggaggaggtctggtaccctggtg
atcgacttccgcagtggcgggcggccagaggagtatgagggggaataccagtgctttgcc
cgcaacaagtttggcacggccctgtccaataggatccgcctgcaggtgtccaaatctcct
ctgtggcccaaggaaaacctagaccctgtcgtcgttcaagaaggtgctcccttgacgctc
cagtgcaaccccccacctggacttccgtccccagtcatcttctggatgagcagctccatg
gagcccatcacccaagacaagcgtgtctcccagggccataacggagacctgtatttctct
aatgtgatgctgcaggacatgcagacggactacagctgcaatgcccgcttccacttcacc
cacaccatccagcagaagaacccattcaacctcaaagtccttaccaaccacccctataat
gactcgtccttaagaaaccaccctgacatgtacagtgcccgaggagttgcagaaagaaca
cccagcttcatgtatccccagggcactgcaagcagtcagatggtgctgcgtggcatggac
ctcctgctggagtgcatcgcctccggggtcccaacaccagacatcgcatggtacaagaaa
ggtggggacctcccgtctgacaaagccaagtttgagaactttaacaaggccctgcgtatc
accaacgtgtccgaggaagactccggggagtatttctgcctggcctccaacaagatgggc
agcatccggcacacgatctcggtgagagtaaaggctgctccctactggctggacgaaccc
aagaaccttatcctggctcctggcgaggacgggagactggtgtgtcgagccaacgggaac
cccaagcccaccgtccagtggatggtgaatggggaacctttgcaatcggcaccacccaac
ccaaaccgtgaggtggccggggacaccatcatcttccgggacacccagatcagcagcagg
gccgtgtaccagtgcaacacctccaacgagcacggctacctgctggccaacgccttcgtc
agcgtgctggacgtgccgcctcggatgctgtcaccccggaaccagctcatcagggtgatc
ctgtacaaccggacgcggctggactgcccgttctttgggtctcccatccccacactccga
tggtttaagaatgggcaaggaagcaacctggatggtggcaactaccatgtctacgagaac
ggcagtctggaaatcaagatgatccgcaaagaggaccaaggcatctacacctgtgttgcc
accaacatcctgggcaaagctgagaaccaggtccgcctggaggtcaaagaccccaccagg
atctaccgcatgcctgaggaccaggtcgccaaaaggggcaccacggtgcagctggagtgt
cgcgtgaagcacgacccctccctgaagctcacggtgtactggctgaaggacgacgagccc
ctctacgtcgggaacaggatgaagaaggaagaggactccctgaccatctttggtgtggcc
gagcgggaccagggtagctacacatgcgttgccagcaccgagctggaccaagacctggcc
aaggcctacctgaccgtgctagctgatcaggccactccaactaaccgtttggctgccctg
cccaaaggacggccagaccgaccccgggacctggagctcaccgacctggccgagaggagc
gtgagactgacctggattccgggggacgataacaacagccccatcacagactacgttgtc
cagtttgaagaggaccagttccagccaggggtctggcatgaccattccaagttcccagga
agtgtcaactcagccatcctccagctgtccccctatgtcaactaccagttccgggtcatt
gccatcaatgaggtgggcagcagccatcccagcctcccgtccgagcgctaccgaaccagt
ggagcaccccctgagtccaacccctctgatgtgaagggagaggggaccagaaagaacaac
atggagatcacgtggacgccgatgaacgccacctccgcctttggccccaacctgcgctac
atcgtcaagtggcggcggagagagacccgagagacctggaacaatgtcactgtgtggggc
tcccgctatgtggtggggcagacccctgtctacgtgccctatgagatccgagtccaggca
gaaaatgactttgggaagggccctgaaccagacactgtcatcggttactctggagaagat
tatcccagagctgcacccactgatgttaaaatccgagtcctgaacagcacagccatcagc
cttcagtggaaccgcgtctactccgacacggtccagggccagctcagagagtaccgagcc
tactactggagggagagcagcttgttgaagaacctgtgggtgtctcagaagaggcagcaa
gccggcttccccggcgaccgcctccgtggcgtggtgtcccgcctcttcccctacagtaac
tacaagctggagatggctgtggtcaatgggcgaggcgatgggcctcgcagtgagaccaag
gagttcaccaccccggaaggagtacccagtgcccccaggcgtttccgagtccggcagccc
aacctggagacaatcaacctggaatgggatcatccagaacaccccaatgggatcctgact
ggatacactctcaaatacgtggcctttaatggaaccaaagtaggaaagcagatagtggaa
aacttctctcccaatcagaccaagttcacgatgcaaagagcagaccccgtgtcgcgctac
cgcttttccctcagtgccaggacgcaggtgggctctggggaagcagtcacagaggagtca
ccagcacccccgaatgaagctgctccaaccgcagctcctcccacgttgcccccgaccacg
gtgggtgtgacgggcacggtgggcagtactgatgccactgctgccaccaccgaagccaca
acagtccccaccatcccaactgtcgcaccctccaccgtcgccaccaccaccgtcgccaca
actactacaaccactgccgccgccaccaccacggagagtcctcccaccaccaccaggact
gagattcaagaatccgcccccgatgagcaatccatctggaacgtcacagtgctccccaac
agtaaatgggccaacatcacctggaagcacaatttcgggcccggaactgactttgtggtt
gagtacatcgacagcaaccatacgaaaaaaactgtccctgttaaggcccaggcccagccc
atacagctgacagacctctatcccggtatgacatacacgttgcgagtttattcccgggac
aacgagggcatcagcagtaccgtcatcacctttatgaccagtacagcctacaccaacaac
caggcggacatcgccacccagggctggttcattgggctcatgtgtgccgtcgccctcctg
gtgctgaccctgctcatcgtctgtttcatcaagaggagtcgaggcggcaagtacccagtg
cgagaaaagaaggatgttccccttggccctgaggaccccaaagaagaggatggctccttt
gattacagtgacgaggacaacaagcccttgcagggcagccagacgtccctggatggtacc
atcaagcagcaggagagtgatgacagcctggtggactacggcgagggcggcgagggacag
ttcaatgaggacggctccttcatcggccagtacacagtcaaaaaggacaaggaagagaca
gagggcaacgaaagctcagaggccacatctcctgtcaacgccatctattctctggcctaa
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