Orcinus orca (killer whale): 101280679
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Entry
101280679 CDS
T05247
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03013
Nucleocytoplasmic transport
oor05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101280679 (NUP50)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101280679 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101280679 (NUP50)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101280679 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
101280679
NCBI-ProteinID:
XP_004279629
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All DBs
Position
11:98514808..98536224
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AA seq
469 aa
AA seq
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MAKRIAEKELTDRNWDQEDEAEEVGTFSVASEEVLKNRAIKKAKRRNVGFESDGGGAFKD
FKGLVIPSGGGGFSGFGNGAEGKPLEGLSNGNSITSAPPFSSARTATETKATFGSVAVNG
PTSLVDKKISNPKTNGDSQQPASSGLTSSAARHRNAYHKQLAALNCSVRDWIVKHVNTNP
LCDLTPIFKDYEKYLASIEQQHGNSGSSNSEGETNKVSVETQPPSLFGSTELQQESTFLF
HGNKTEDTSEKKVEAVSEKNKDPSLGATSASFNFGKKIDSSVLGSLNSGPLTGFSFSSGN
SSLFGKDITQSKPVSSPFSTKTLESRAEVGGSDCKGGDEEESDEPPKVVVTEVREEDAFY
SKKCKLFYKKDNEFKEKGVGTLHLKPTANQKTQLLVRADTNLGNILLNVLIPPNMPCTRT
GKNNVLIVCVPNPPIDEKNATTPVTMLIRVKTSEDADELHRILQEKKDA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaattgccgagaaggaactgacggataggaattgggatcaagaagatgaa
gcagaagaggtgggaacattctcggtggccagtgaggaagtcttgaagaatagagccata
aagaaagcaaagcggaggaatgttggatttgaatctgatggtggaggggcctttaaagac
tttaaaggtttggtcataccttctggaggaggagggttttctgggtttggtaatggcgct
gaagggaagcctttggaaggactgtcaaacggaaacagcataactagtgcccctcccttc
tccagtgcaaggacagcgaccgagaccaaggccacctttgggtctgttgctgtaaatggc
cctacctccttggtcgataaaaagatttcaaatcccaaaactaatggcgacagtcagcag
cctgcctcctctggccttacctccagtgccgcccgccacaggaatgcctatcataagcag
ttggcggccttaaactgctctgttcgggattggattgtgaagcacgtgaacacgaacccg
ctctgtgatctgacacctatctttaaagactatgagaaatacttagcaagcatcgaacag
caacatgggaacagtggcagcagtaattctgaaggtgaaaccaacaaagtatcagttgaa
acacagcctccttccctgtttggttcaacagaattacagcaagagtcaacatttttgttt
catggcaacaaaactgaggatacatctgaaaagaaggtggaggctgtgtctgaaaagaac
aaggacccgtcactaggagcaacaagtgcctcatttaatttcggcaagaaaattgatagt
tctgttttgggctccttaaactctggccccttgactggattttcattttcttctggaaac
tccagtttatttggcaaagatattacccagagtaaaccagtttcttcaccattttccact
aaaacgttggagagccgagcagaagttggcggcagcgactgcaaaggtggagatgaagag
gagagtgatgagccccccaaagtagtagttactgaagtaagagaagaagatgctttttac
tccaaaaagtgtaaactattttacaagaaagacaatgaatttaaagagaagggtgtaggc
actctacatttaaaacctacggctaatcagaagacacagcttttagtgcgggcagacacc
aatttaggcaacatactgctcaatgttctgattccgcccaatatgccgtgtactcgcaca
gggaaaaacaatgtgcttattgtctgcgttccaaacccacccattgatgagaaaaacgcc
accaccccagttaccatgttaattcgggtaaaaacaagcgaggatgcagatgagctgcac
agaattttacaggagaaaaaggatgcctga
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