Orcinus orca (killer whale): 101280956
Help
Entry
101280956 CDS
T05247
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03013
Nucleocytoplasmic transport
oor03015
mRNA surveillance pathway
oor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101280956 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
101280956 (ACIN1)
03015 mRNA surveillance pathway
101280956 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101280956 (ACIN1)
03041 Spliceosome [BR:
oor03041
]
101280956 (ACIN1)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101280956 (ACIN1)
Spliceosome [BR:
oor03041
]
Complex C
Other components
EJC/TREX
101280956 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
101280956
NCBI-ProteinID:
XP_004283223
LinkDB
All DBs
Position
2:complement(127200322..127233484)
Genome browser
AA seq
1337 aa
AA seq
DB search
MWRRKHPRISGGTRGVLSGNRGVDYGSGRGQLGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSASISEEKGESDDEKPRKGERRSSRVRQARAAKLS
ECSQAAEEEEDQETPSRNLRLRADRNLKTEEEEEEDEEEEEEEEEEEDDDEGQKSRDAPV
LKQFKEEEGEEKPSVKVEEVMDERSQTIRSQEQEGLERGGRVTRSQEEARRSHLARHQQE
KEMKTASPLEEEEREIKPSKSLEEKSKSPSPPRLTEDLEKAPVVLQPEQTASEEETPPPL
LTKEASSPPPNTQLQSEEEIEPMEGPAPPVLIQLSPPNTDAEARELLLSQHTVQLVGGLS
PLSSPADTKVESPVEKVPEESVLPLVQKSTQAESSTQKGLETESEKSAQPLPLKIEEFTL
AKGITEESLEQKEGRRASHTLVPSHRLKRSADSSSSRSSSSSSSSSRSRSRSPDSSGSQS
HSPPRSKQRDVSQAGTHSNPRGRPKMGSRSTSESRSRSRSRSRSASSNSRKSLSPGVSRD
SSTSYTETKDPSSGQEVATPPLPQLQVLEPKERTSTSTSIRVRRMSQPEPAEKHVTQRLQ
PERGSPKKCEAEEAEPPAATQPQTSETPTSHLPESERIHHTVEEKEEVTMDTSENRPENE
VPEPPMPIADQVSNDDRPEGSAEDEEKKESSLPKSFKRKISVVSATKGVPAGNSDTEGGQ
PSRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETER
NGDDGTHDKGLKICRTVTQVVPSEGQENGQREEEEEEKEPEAEAPVPPQVSVEVALPPPV
EHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFT
LGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCA
DYAEQDELDYHRGLLVDRPSETKTEEQGVPRPLHPPPPPPAQPPQHPRAEQREQERAVRE
QWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQE
EPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKERE
KEAERERTRQLEREKRREHSRERDRERERDRERDRGDRDRERDRDRERGRERDRRDTKRH
SRSRSRSTPVRDRGGRR
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggaaacacccgagaatttccggaggaacccggggagttctgagtggtaat
cgaggggttgactatggaagtgggcggggccaactcggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacagaaacactcaacaccccatgctgca
ttccagccaaattcccagattggcgaggaaatgagccagaacagtttcataaagcagtat
ctggaaaagcagcaggagctgcttaggcagcgtctggaacgtgaagctcgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcccgagggagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcacccagaaaaagcgcctctatttccgaagagaaaggtgaatctgatgatgagaaa
ccaaggaaaggagaaagacgatcatccagagtcagacaggcaagagcagctaaactttct
gagtgtagccaggctgctgaggaggaagaggatcaagaaacaccttccagaaatctgagg
ctcagagcagatcgaaatttgaaaactgaagaggaagaagaagaggacgaggaagaggaa
gaagaggaggaagaggaggaagacgatgatgagggacaaaaatctagggatgcaccagtc
ctgaagcagtttaaggaagaagagggggaagagaagcccagtgtaaaagttgaggaggta
atggatgagagatcccaaactataagatcccaggaacaggaggggttagagagaggaggg
agagttacaaggtcccaggaagaggccagaagaagtcatctggccagacatcagcaggag
aaagagatgaaaacagcttctccccttgaggaagaagaaagagaaataaaaccttcaaaa
agcttggaggaaaaatccaagtccccttcccctcctcgattgactgaagatctggagaag
gcccctgttgtgctacaaccagagcaaactgctagtgaggaggagactcccccaccttta
cttaccaaggaagcatcttctccaccacctaatacacaactccagagtgaagaagaaata
gaacccatggaaggcccagcccctcctgtccttattcagttgtctcctcctaatacagat
gctgaggccagggagctcttactgtctcagcatactgtgcagttggtgggaggtctgtct
cctttgtcaagccctgcagacaccaaagtagaatctccagtagagaaagtgccagaggag
agtgtcctgcctctagttcagaaaagcacacaagctgaatcctcaacccagaagggtctt
gaaactgaatcagaaaaatcagctcaaccactccctctaaaaatcgaggaattcacactg
gccaaagggatcacggaggaatctttggaacagaaggaaggcaggagggcttctcatact
cttgtcccaagccacagattgaaacggtcagctgactcatcctctagccgatcctcctca
tcgtcatcctccagttctagatcaagatctcgctctcctgacagctcaggctctcagtct
cattcacctccaagatccaagcagagagatgtatctcaggcaggtactcattccaaccct
cgtggtagacccaagatgggctccaggtcaacatcagaatccaggtcccgttcccgttcc
cgttcccgttcagcgtcaagcaacagcagaaaatctctgagccctggagtctccagggac
agcagcaccagctacactgaaaccaaagatccctcttctggtcaggaggttgcaactcca
ccattgccacagcttcaggtccttgagccaaaggagaggacttccacctcaacctctatc
cgagtgaggcgtatgagccaacctgagccagctgaaaagcatgtgacccagaggttacag
cctgagcgggggagcccaaagaagtgtgaagctgaagaggcagagccgccagctgccaca
cagccccagacctcagagactccgacctcccacctaccagaatcagaaaggattcatcac
actgttgaggagaaggaggaagtgaccatggacacaagtgaaaacagacctgaaaatgag
gttccagagccccccatgcctattgcagaccaagtcagcaatgatgaccgcccagagggc
agtgccgaggatgaggagaagaaagagagctcgctgcccaaatcattcaagaggaagatc
tccgttgtctcagctaccaagggggtgccagctggaaacagtgacacagaggggggccag
cctagtcggaagcggcgttggggagccagcacggccaccacacagaagaaaccttccatc
agtatcaccaccgaatcactcaagagcctcatccccgacatcaaacccctggcggggcag
gaggctgttgtggatcttcatgctgacgactcccgaatctctgaggatgagacagagcgt
aatggtgatgatgggacccatgacaaggggctgaaaatatgccggaccgtcactcaggtg
gtgccttccgagggccaggagaatgggcagagggaagaggaggaagaagagaaggagcct
gaagcagaagcccctgtacctccccaggtctcagtagaggtggccttgcccccacctgtg
gagcatgaagtaaagaaagtgactttaggagataccttaactcgacgttccattagccag
cagaagtcgggagtttccattacaattgatgacccagtccggactgctcaagtgccctcc
ccaccccggggcaagatcagtaacatcgtccacatctccaatttggttcgtcccttcact
ttaggccaactgaaggaattgttgggacgtacaggaactctggtagaagaggctttctgg
attgacaagatcaaatctcactgctttgtaacgtactcgacagtagaggaagcagttgcc
acccgcacagctctacatggggtcaaatggccccagtccaaccccaaattcctctgtgct
gactatgctgagcaagatgagctggattatcaccgaggcctcttggtggaccgtccctct
gaaactaagacagaggagcagggggtaccacggccgctgcaccccccgcccccgccccca
gcccagccaccacagcaccccagggcagagcagcgggagcaggagcgggcggtgcgggaa
cagtgggcagagcgggaacgggagatggagcggcgggagcgaacgcgatcagagcgcgaa
tgggatcgggacaaagttcgagaagggccccgttcccgatcacggtcccgtgaccgccgc
cgcaaggaacgcgcaaagtctaaagaaaagaagagtgagaagaaagagaaagctcaggag
gaaccacctgccaagctgctggatgaccttttccgtaagaccaaggcagctccctgcatc
tattggctcccactgactgacagccagattgttcagaaggaggcagagcgcgctgaacgg
gccaaggagcgggagaagcggcgaaaggagcaagaagaagaagagcagaaggagcgggag
aaggaggcggagcgggaacggacccgacagctggagcgagagaagcggcgagagcacagc
cgggagagggacagggagagagagagggacagggagcgggacaggggagatcgagatcgg
gagagggacagggaccgggaacgaggcagggagagggaccgcagagacaccaagcgccac
agcaggagccggagtcggagcacacctgtgcgggaccggggtgggcgccgctag
DBGET
integrated database retrieval system
