Orcinus orca (killer whale): 101280999
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Entry
101280999 CDS
T05247
Symbol
DDX19B
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X2
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03013
Nucleocytoplasmic transport
oor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101280999 (DDX19B)
03015 mRNA surveillance pathway
101280999 (DDX19B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101280999 (DDX19B)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101280999 (DDX19B)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101280999 (DDX19B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101280999
NCBI-ProteinID:
XP_004273303
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All DBs
Position
20:13195358..13215225
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AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESFSNLHLKEEKIKPDANGAVVKTNANAEKSDEEEKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANRYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV
ALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggcggtggacgagcaggaagcggcagccgagtcgttc
agcaacttgcatcttaaggaagagaaaatcaaaccagatgccaatggtgctgtggtcaag
accaatgctaatgcagagaagtcagatgaagaagagaaagaggacagagccgcccagtcc
ttactcaacaagctgatcagaagcaaccttgttgataacaccaaccaagtggaagtcctg
cagcgggatccaaactccccgctctactcagtgaagtccttcgaggagcttcggctgaaa
ccacagcttctccagggagtctacgccatgggcttcaaccgtccatcgaagatacaggag
aatgcattgcctttaatgcttgctgagcccccacagaacttaatagcccagtctcagtct
ggtactggtaaaacagctgcctttgtgttggccatgctcagccaagtagaacctgcaaac
agatacccccagtgtctgtgcctctccccaacttacgagctcgctcttcaaacgggaaaa
gtgattgagcagatgggcaaattttaccctgaactgaagctagcttatgctgttcgtggc
aataaattggaaagaggtcagaagatcagtgagcacattgtcattggcacccctgggacc
gttctggactggtgctccaagctcaagttcattgaccccaagaagatcaaggtgtttgtt
ctggatgaggctgacgtgatgatagctactcagggccaccaagatcagagcatccgcatc
cagaggatgcttcccaggaactgccagatgctgcttttctctgccaccttcgaagactct
gtctggaaatttgcccagaaagtggttccagacccaaacatcatcaaactgaagcgcgag
gaggagacactggacaccatcaagcagtattacgtcctgtgcaatagcagagatgagaag
ttccaggccctgtgtaatatctacggggccatcaccattgctcaagccatgatcttctgt
catacccgcaaaacagctagttggctggcagcagagctctcaaaagaaggccaccaggtg
gctctgctgagtggtgaaatggtggtggagcagagggctgcagtgattgagcgcttccga
gagggcaaagagaaggttctggtcaccaccaacgtgtgtgcccgcggtatcgatgtggaa
caggtgtctgtcgtcatcaactttgaccttcccgtggacaaggatgggaacccggacaac
gagacctacctgcaccggatcgggcgcactggccgctttggcaagaggggcctggccgtg
aacatggtggacagcaagcacagcatgaacatcctgaacagaatccaggagcatttcaat
aagaaaatagaaagactggacacagatgacttggacgagattgagaaaatagccaactga
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