Orcinus orca (killer whale): 101281049
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Entry
101281049 CDS
T05247
Symbol
POLR2C
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03020
RNA polymerase
oor03420
Nucleotide excision repair
oor05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101281049 (POLR2C)
09124 Replication and repair
03420 Nucleotide excision repair
101281049 (POLR2C)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
101281049 (POLR2C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oor03021
]
101281049 (POLR2C)
03400 DNA repair and recombination proteins [BR:
oor03400
]
101281049 (POLR2C)
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
101281049 (POLR2C)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101281049 (POLR2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
101281049
NCBI-ProteinID:
XP_004264975
LinkDB
All DBs
Position
20:complement(27427958..27437970)
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLH
DEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDL
ISNSPRVIPVTSRSRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQAPYDPNGKPERFYYNVESCGSLR
PETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgccaaccagcctaccgtgcggatcacggagctcaccgacgagaatgtcaag
ttcatcatcgagaatacggacctggcggtggcaaattctatccggagggtcttcatcgct
gaggtgcccataatagcaattgactgggttcagattgatgccaattcctcagtccttcac
gatgagttcattgctcacaggcttggattaattcccctcacgagtgacgacattgtggac
aagctgcagtactcccgggactgtacgtgtgaagagttctgccccgagtgctcggtggag
ttcaccctcgacgtgcggtgcaacgaagaccagacgcgtcacgtcacgtctcgagacctc
atctccaacagcccccgggtcattccggtgacatcccggagccgagataatgaccccaac
gactacgtggagcaggatgacattctcatcgtcaagctgagaaagggccaggagctgagg
cttcgagcctacgccaaaaagggctttggcaaggaacacgccaagtggaacccgactgca
ggcgtggcttttgaatacgatcccgacaatgccctgaggcacacggtgtaccccaagccg
gaggagtggccaaagagtgagtactcagagctggacgaggatgagtcgcaggcgccctac
gaccccaacggcaagccggagaggttttactacaacgtggagtcctgtggctctctgcgc
cctgaaaccattgtcctgtcagccctgtctggattaaagaagaagctgagtgatttacag
acccagttaagccacgagatccagagtgacgtcctgaccataaactag
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