Orcinus orca (killer whale): 101281082
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Entry
101281082 CDS
T05247
Symbol
HIF3A
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X2
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101281082 (HIF3A)
Transcription factors [BR:
oor03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101281082 (HIF3A)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1
PAS
PAS_4
PAS_9
HLH
PAS_2
SpoVAD
Motif
Other DBs
NCBI-GeneID:
101281082
NCBI-ProteinID:
XP_004271190
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All DBs
Position
20:49948673..49977910
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AA seq
669 aa
AA seq
DB search
MALGLQRARSSTELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLT
ISYLRMHQLCAAGEWNQVGAGGEPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLS
QLELIGHSIFDFVHPCDQEELQDALTPRQSLSKKKPEAPTERCFSLRMKSTLTSRGRTLN
LKAATWKVLHCSGHMRAYKPPAQSSPAGSPHLEPPLQCLVLICEAIPHPGSLEPPLGRGA
FLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVGQSIHTLLSKGQAV
TGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRVEETEVVLSLEQTERHS
RRHVQRGTPSQKDAPNPGDSLDTSGPRILAFLHPPALSEAALAADPRRFCSPDLRRLLAP
ILDGTSVAATPSAPPAPRRPRSPLPADLPDELLVDVENAHKLFASGKDLEAVETDLDIAQ
DVDALDLEMLAPYISMDDDFQLNSSEQLPRAYHRPPGAVPRPRARSFHGMSPPTPEPSLL
PRWGSDPRLSCSSPSRGDPSASSPMAGARKRALAQSAEDEAEGVELLGVRPPKRSPSPEP
ENFLLPPLSLSFLLTGGPAPGSQQDPSTHLLELNEPLGLGPSLLSLYPDEDTAQPRSHFQ
PAAGLAQAN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggggctacagcgcgcaaggtcgagcacggagctgcgcaaggagaagtcccgg
gatgcagcccgcagccggcgcagccaggagaccgaggtgctgtaccagctggcgcacacg
ctgcccttcgcgcgcggggtgagcgcccacctggacaaagcctccatcatgcgcctcacc
atcagctacctgcgcatgcaccaactctgcgccgcaggggagtggaaccaggtgggagca
gggggcgaaccactggatgcctgctacctgaaggccctggagggcttcgttatggtgctc
accgccgagggagacatggcttacttgtcagagaatgtcagcaaacacctgggcctcagt
cagcttgagctgatcggacacagtatctttgattttgtccatccctgtgaccaagaggag
cttcaggacgccctgactccccggcagagcctgtccaaaaagaagccggaggcccccacc
gagaggtgcttctccttgcgcatgaagagcaccctcaccagccgcgggcgcaccctcaac
ctcaaggcggccacctggaaggtactgcactgttctggacacatgagggcctacaagccc
cctgcacagtcttccccggccgggagcccccacttggagccccccctgcaatgcctggtg
ctaatctgtgaagccatcccccaccctggcagcttggagcccccgttgggccggggggcc
ttcctcagccgccacagcctggacatgaagttcacctactgtgatgagaggattgcggag
gttgctggctacagccccgatgacctgattggctgttctgcctatgagtacatccatgcg
ctggactcagatgcagtcggccagagcatccataccttgctgagcaagggccaggcagta
acggggcagtaccgcttcctggcccggagtggtggctacctgtggacccagacccaggcc
acagtggtgtcggggggccggggcccccagtctgagagtatcgtctgcgtccatttcctg
atcagccgggtggaagagaccgaagtggtgctgtccctggagcaaacggagcgacactct
cgcagacacgttcagcggggcaccccctctcagaaggatgcccctaatcctggtgacagc
cttgacacctctggtccccggatcctagccttcctgcacccccctgccctgagtgaggcc
gccctggccgctgacccccgtcgtttctgtagccctgacctccgtcgcctcctggcaccg
atcctggatgggacttcagtagccgctacccccagtgcacccccagccccacgacgcccc
cgaagtcctcttccggctgatctcccagatgaactacttgtggatgtggagaatgcacac
aaactcttcgcctctgggaaagacctcgaggcagtggagacagatctagatatagctcag
gacgtcgatgctctggacttggagatgctggccccctacatctccatggatgatgacttc
cagctcaactccagtgagcagctacccagggcctaccacagacctccaggggctgttccc
cggccccgtgcacggagcttccacggcatgtcgcccccaacccctgagccctccctgctg
ccccgctgggggagtgacccccggctgagctgttccagcccctccagaggggacccctca
gcatcctcccccatggctggggctcggaagagggccctggcccagagtgcagaggacgag
gcagagggggtggagctgctgggagtgagaccccccaaacggtcccccagcccagaaccc
gaaaacttcctgctgcctcccctcagcctgagtttccttctgacaggaggaccagcccca
gggagccagcaggatcccagcacccacctcctagaactgaatgagcccctgggcctgggc
ccctccctgctctctctctacccggacgaggacaccgcccagcccaggagccactttcag
ccagcggcaggcttggcccaggccaactga
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