Orcinus orca (killer whale): 101281230
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Entry
101281230 CDS
T05247
Symbol
GSPT2
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3B
KO
K03267
peptide chain release factor subunit 3
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101281230 (GSPT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101281230 (GSPT2)
03012 Translation factors [BR:
oor03012
]
101281230 (GSPT2)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101281230 (GSPT2)
Translation factors [BR:
oor03012
]
Eukaryotic type
Release factors
101281230 (GSPT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
DUF5096
Motif
Other DBs
NCBI-GeneID:
101281230
NCBI-ProteinID:
XP_033273929
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Position
X:complement(46117230..46119552)
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AA seq
632 aa
AA seq
DB search
MDPGSSSSSDSAPDCWDQVDMEAPGLAPSGDGAASAAAAAAAEAQREPLISAFSRQLNVN
AKPFVPNVHAAEFVPSFLRGPCQPQIPPADAPDIDETCPGAGDPQGKRLGRGAPVEHSKE
EQLVWREGSNSAVTMELLEPVVENGEVEMVLEESWEHNKEVSEAEPGGSSLGDSGPPEES
GQELIEKEEIRKSKSVVIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLE
KYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVP
NMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTV
NWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPY
LDNMPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGIL
SDDAETDYVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDVQIVIIEHKSIIC
PGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLET
FKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcagcagcagcagcagcgactcggctcccgactgctgggaccaggtggac
atggaagcaccgggtttggccccgagcggggacggagccgcctcggcggctgctgcggcg
gcggccgaggcccagcgtgagcccctcatctcggccttcagccgacagctcaacgtcaac
gccaaacccttcgtgcctaacgtccacgccgcggagttcgtgccgtccttcctgcggggc
ccgtgccagccgcagatccccccggccgacgcccccgacatcgatgaaacctgccccggc
gcgggcgaccctcaaggtaaaaggctgggacggggggcacctgtggaacattccaaagag
gaacagttagtgtggcgtgaaggttccaattcagccgttaccatggaacttttggaacct
gttgtagaaaatggagaggtggagatggtcttagaagaatcatgggagcacaataaagaa
gtaagtgaagctgagccagggggtagttccttgggagattcggggcccccagaagaaagt
ggccaggaattgattgagaaagaggaaatcagaaaatcgaaatctgtggtcataccctca
ggtgctcctaaaaaagaacacgtaaatgtggtattcattgggcatgtagatgccggaaaa
tcaaccattggaggacagataatgtttttgacaggaatggttgacaaaaggacacttgag
aaatatgaaagagaagctaaagaaaaaaacagagaaacttggtatttgtcatgggcctta
gatacaaatcaggaagaacgagacaagggtaaaacagtagaagtgggtcgtgcctatttt
gaaacagaaaagaaacatttcacaattttagatgcccctggccacaagagttttgtccca
aatatgattggtggtgcttctcaagctgatttggctgtactggtaatctctgccaggaaa
ggagagtttgagactggatttgaaaaaggtggacagacaagagaacatgcaatgttggca
aaaacagcaggggtgaaatatttaatagtgcttattaataagatggatgatcccacagta
aattggagcagcgagagatatgaagaatgtaaagaaaagctagtgccctttttgaagaaa
gtcggcttcagtcccaaaaaggacattcactttatgccctgctcagggcttactggggca
aatattaaagagcaatcagatttctgcccttggtacactggattaccattcattccgtat
ttggataatatgccaaacttcaacagatccattgatggaccaattagactgccaattgtg
gataagtacaaggatatgggcactgtggtcctgggaaagctggaatcaggatccattttt
aaaggccagcagcttgtgatgatgccaaacaagcacaatgtggaagttcttggaatactt
tctgatgatgctgaaactgattatgtagccccaggtgaaaaccttaaaatcagactgaag
ggaattgaagaagaagagattcttccaggattcatactctgtgatcctaataatctttgc
cattctggacgcacatttgatgttcagatagtgattattgagcacaagtccatcatctgc
ccaggttataatgcggtgctgcacattcatacttgtattgaggaagttgagataacagcc
ttaatctccttggtagataaaaaatcaggagaaaagagtaagacacggccccgcttcgtg
aaacaagatcaagtgtgtattgcccgtttaaggacagcaggaactatctgccttgagaca
ttcaaagattttcctcaaatgggtcgttttactttaagagatgagggtaagaccattgcg
attggaaaagttctgaaactggttccagagaaggactaa
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