Orcinus orca (killer whale): 101281309
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Entry
101281309 CDS
T05247
Symbol
CHRNE
Name
(RefSeq) acetylcholine receptor subunit epsilon isoform X2
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101281309 (CHRNE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oor04040
]
101281309 (CHRNE)
Ion channels [BR:
oor04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
101281309 (CHRNE)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
101281309
NCBI-ProteinID:
XP_004267018
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Position
19:11194285..11216962
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AA seq
491 aa
AA seq
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MAGALLSALLLLQLLGRGEGKNEELRLYHHLFDNYDPGRRPVQKPEDTVTITLKVTLTNL
ISLNEKEETLTTSVWIGIDWHDYRLNYSKGDFGGIETLRVPSELVWLPEIVLENNIDGQF
GVAYEANVLVSEGGYVSWLPPAIYRSICAVEVTYFPFDWQNCSLVFRSQTYNAEEVELVF
AVDDDGDAISNIDIDTEAYTENGEWAIDFCPGVIRRHDGGSNDGPGDTEVIYTLIIRRKP
LFYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLIAQKTPETSLS
VPLLGRYLIFVMVVATLIVMNCVIVLNVSCRTPATHAMSPRLRHVLLELLPQLLGSRAPP
EVSRAASPPRRASSLGLLLRAEELILKKPRSELMFEGQRHRHRTWTAALCQSLGAAAPEI
RCCVDAVNFVAESTRDQEATGEEVSDWVRMGKALDNICFWAALVLFLVGSSLIFLGAYFN
QVPELPYPPCM
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggctctgctcagtgccctgctcctcttacagctgctgggcagaggtgaaggg
aagaacgaggagctgcgtctttaccaccacctcttcgacaactatgacccaggacgccga
ccagtgcagaagcctgaggacactgtcaccatcaccctcaaagtcaccctgaccaacctc
atctcactgaatgagaaagaggagaccctcaccaccagcgtctggattggaatcgactgg
catgattaccgactcaactacagcaagggcgattttgggggcatagaaaccctgcgggtc
ccttcagaactcgtatggctgccagagattgtgctggaaaacaatatcgacggccagttc
ggtgtggcctatgaagccaacgtgctggtctcggagggcggctacgtgagctggctgccc
ccggccatctaccgaagtatctgcgccgtggaggtcacctacttccctttcgactggcag
aactgctctcttgttttccgctcgcagacgtacaatgcagaagaggtggagctcgtcttt
gctgtggacgacgatggcgacgccatcagcaacatagatatcgacactgaggcctatact
gagaacggggagtgggccatcgacttctgccccggggtgatccgccgccacgacggtggc
tctaatgatggtccaggggacactgaagtcatctacacgctcatcattcgccggaagccg
ctcttctacgttattaacatcatcgtgccttgcgtgctcatctcgggcctagtactgctc
gcctatttcctgccggcacaggccggcggccagaaatgcaccgtctccatcaacgtcctg
ctcgcccagaccgtcttcttgttcctaattgcccagaaaaccccagagacatctctgagc
gtgccgctgctgggcaggtacctcattttcgtcatggtggttgccacgctcattgtcatg
aattgcgtcatcgtgctcaacgtgtcttgtcggacgcccgccactcacgccatgtccccg
cggctgcgccacgtcttactggagctgctgccccaactcctgggctcgcgcgcacccccc
gaggtctcccgggccgcctcgcccccaaggcgggcgtcgtccttgggcctactgctccgc
gcggaggagctgatactgaaaaagccgcggagcgagctcatgtttgaggggcagaggcac
cggcacagaacctggactgctgccctctgccagagcctgggcgccgccgcccccgagatc
cgctgctgtgtggatgccgtgaacttcgtggccgagagcacgcgagaccaggaggccacc
ggcgaggaggtgtccgactgggtgcgcatggggaaggccctcgacaacatctgcttctgg
gccgctctggtgctcttccttgttggctccagcctcatcttcctcggggcctacttcaac
caagtgcccgaactgccctacccgccctgtatgtag
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