Orcinus orca (killer whale): 101281440
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Entry
101281440 CDS
T05247
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101281440 (SOX30)
Transcription factors [BR:
oor03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101281440 (SOX30)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101281440
NCBI-ProteinID:
XP_004281026
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Position
3:52199605..52237881
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AA seq
764 aa
AA seq
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MERARPEPPPQPRQLPRATALRPAPPPVAVEGAFFRAAAAEPSASPLAPCAAAIVTLGSS
CGEAPASGVQSAARRVLQVNPEQVLLLPPGPPLLQAREEGAAASPAQARLLQLRPDLLLL
PPPPPPEGSPCRPQGLGQPLPVHVKAEKQELDPSLDPSVGPRRAVKAGPKASKAAKAGGP
GPAIDSPRGDEKGKMEEEEEVMSYTAAKGGEGKSLAAISEGVIKTEEPERLREDSRLGTE
PASSGLVHGSKDVILTQPSIAFGPHQQDLRIPLTLPTVPPGARIQFQGPPPSELIGLTKV
PLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWAR
IHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWIYQPR
PGKRKRFPLSVSNVLSGTTQNIISTNSTTVYPYCSPTYSVVIPSLQNPITHSLDEVPPAI
QLPTPAVQRPSPITVFQPSISSTAQVAVQAPSLPLCPPLLPQCFAGPSETDTHQLHSGAS
HSVKRPTPVFLESTSRIPTSASTAHARFAASTIQPPEEYPSISTCPRSAPIPQAPPIPHS
HVCQPPPLGHAATLFGTPPRFAFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSAVPECL
GYYEDRCQNHEAMFSALNRDYPYGDYPDERAHSEDFWSCESMDGTSYCNSHSHSGEEYLN
LVPQLDTGALERVFTAPTSTPSNIQQVNVTDSDDEEEEKVLKNL
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccgccgcctcagccgcgccaactgccgcgggcgaccgcg
ctgcgccccgctccgcccccggtggctgtcgagggtgccttctttcgggcagcggccgcg
gagccctctgcgtcgccgctcgccccgtgcgcggccgccattgtgacgttaggctcgtcg
tgcggggaggctccggcgtcgggcgtacagtccgcggcacggcgggtactgcaggtgaac
ccggagcaggtgttactgctgccgcctgggccaccactgcttcaggcccgggaggaaggc
gcagccgcctctcccgcgcaggcgcggctgctgcagctgaggcccgacctgctactgctg
ccgccgccgccgccacccgagggctccccctgcaggcctcaggggctggggcagcccctg
ccggtgcacgttaaggcagagaagcaggagctggaccccagcttggatccgtcagtggga
cctcggagggccgtcaaggcgggccctaaggcctccaaggcggcgaaggcaggaggcccc
gggccggccatcgacagcccccgaggggacgagaagggcaagatggaggaagaggaggag
gtcatgagctacacggcggcgaaaggaggggaaggcaaaagcctggcggctatcagcgaa
ggagtcatcaaaacggaggagcctgagagactccgcgaggactccaggctcggcacagag
cccgcgtccagtggcctggtccatggcagcaaggatgtcatcttgacccagccgtccatt
gcctttgggccgcaccagcaagacctcaggatccctttgactcttcctaccgtgccccct
ggagcccggatccagtttcagggacctccaccttcagagctgataggattgaccaaggtc
cccttgacaccagtgcctattaaaatgcagtccttactggagccttctgtaaaaattgaa
accaaagatgtcccactcaccgtgcttccctcagatgcaggaataccagacactcccttc
agtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatggtttgggcaagg
atccaccggccagcactagccaaagctaacccagcagccaacaatgcagaaatcagtgtc
cagctcgggttagagtggaacaaacttagtgaagaacaaaagaaaccctattatgatgaa
gcacaaaagattaaagaaaagcacagagaggaatttcctggttggatttatcagcctcgt
ccagggaagcgaaaacgcttccctctaagcgtttccaatgtactttctggtaccacacag
aatatcatctctacaaattcaacaacagtttatccttattgctcacctacctactctgtg
gtaattcccagcctacagaaccccatcactcattcacttgatgaagttccacctgccatc
cagctgcccacacctgcagtccagcgcccaagccccatcacagttttccagccaagcatc
tccagtactgcccaggtggctgtccaggctccaagtttgcccctctgtccaccactccta
ccccagtgctttgctgggccctctgaaacggacactcatcagctgcattctggagccagt
cactctgtgaagagacccactcctgtctttctggagagcaccagcaggattccaactagt
gcaagtactgcccacgccagatttgcagcctctaccatccagcctcccgaagagtatccc
agcatctccacttgtcccagaagtgctccaatcccccaagctcctcctattccacactca
catgtctgccagccccctccccttggccatgcagccacattatttgggacgccaccgcga
ttcgcttttcatcacccttacttcctacctggacctcactacttcccatcaagcacgtgc
ccttatagtcggcctccttttggctatggaaattttccaagtgcagtgccagaatgcctt
ggttattatgaagacagatgccagaaccatgaggctatgttttcagctttaaatagagac
tatccttatggagactacccagatgaacgtgctcacagcgaagatttttggagttgtgag
agcatggatgggacctcttactgtaacagtcatagccacagtggggaagaatacttaaat
ctcgtgcctcagctggacactggagccttggaaagggtcttcacagccccgacatcaact
ccctctaacatccagcaagtcaatgtcactgacagtgatgatgaggaagaagaaaaagtg
ctcaagaatttataa
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