Orcinus orca (killer whale): 101281559
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Entry
101281559 CDS
T05247
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2 isoform X2
KO
K11101
patched 2
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04340
Hedgehog signaling pathway
oor05200
Pathways in cancer
oor05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
101281559 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101281559 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
101281559 (PTCH2)
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Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
101281559
NCBI-ProteinID:
XP_004266344
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Position
1:175988802..176004428
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AA seq
1206 aa
AA seq
DB search
MARPPPLGELTPGYTPPARSAAPQILAGSLQAPLWLRAYFQGLLFSLGCGIQRHCGKVLF
LGLLAFGALALGLRVAIIETDLEQLWVEAGSRVSQELQYTKEKLGEEAAYTSQMLIQTPR
QEGENVLTPEALGLHLQAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKL
FPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLDK
AQVGQAYVGRPCLHPDDLHCPSSAPNHHSRQAPNVAQELSGGCHGFSHKFMHWQEELLLG
GMARDPQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQAGTVLQAWQRRFV
QLAQEALPGNASQQIHAFSSTTLDDILHAFSEVSAARVVGGYLLMLAYACVTMLRWDCAQ
SQGAVGLAGVLLVALAVASGLGLCALLGIAFNAATTQVLPFLALGIGVDDIFLLAHAFTE
APPGTPLQEHTGECLQRTGTSVALTSINNMVAFFMAALVPIPALRAFSLQAAVVVGCNFA
AVMLVFPAVLSLDLHRRHCQRLDVLCCFSSPCSARVIQILPQELGDRTVPVGIAHLTATV
QAFAHCEASSQHVVTILPPQAHLVPPPSDPLASELFSPGGSTRDLLGQEEGTRQKAACKS
LPCARWNLAHFARSQFAPLLLQSHTKAMVLVLFGALLGLSLYGSTLVQDGLALTDVVPRG
TKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPPAMQAPRT
WLHYYRNWLQGIQAAFDQDWASGRITHHSYRNGSEDGALAYKLLIQTGDAQEPLDFSQLT
TRKLVDKDGLIPPELFYMGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIP
AAQPLEFAQFPFLLHGLQKTADFVETIEGARAACAEAGQAGVRAYPSGSPFLFWEQYLGL
RRCFLLAVCILLVCTFLVCALLLLNPWAASLIVLVLAVMTVELFGIMGFLGIKLSAIPVV
ILVASVGIGVEFTVHVALGFLTSQGSRNLRAARALEHTLAPVTDGAVSTLLGLLMLAGSN
FDFIVRYFFVVLTVLTLLGLLHGLVLLPVLLSILGPPPEVVQMYKESPEVLSPPAAQGGG
LRWGVAPTLPQSFARVTTSMTVALRPPPLPGAYIHPASEEPTWSPAATPAASGSSNLSSR
GPCPAT
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggctcggccgccaccccttggggagctgaccccgggctacacacccccagctcgatct
gcagcaccccagatcctagctgggagccttcaggctccactctggcttcgtgcttacttc
cagggcctgctcttctctctgggctgtgggatccagagacactgtggcaaagtgctcttc
ctgggacttttggcctttggggccctagcattgggtctccgcgtggccatcattgaaaca
gacctagaacagctctgggtggaagccggcagccgggtgagccaagagctgcaatacacc
aaggagaagctgggggaggaggctgcgtatacctcccagatgttgatacagaccccgcgc
caggagggggagaacgtcctcacacctgaggcacttggcctccacctccaggcagccctc
actgccagtaaagtgcaagtatcactctatggaaagtcctgggatttgaacaaaatctgc
tacaagtcaggagttcccctaattgaaaatggaatgattgagcggatgattgagaagctg
tttccctgcgtgatcctcacccccctcgactgcttctgggaaggagccaaactccaaggg
ggctctgcctacttgccgggccgccccgacatccagtggaccaacctggatccagagcag
ctgctggaggagctgggcccctttgcctcccttgagggcttccgggagctgctagacaag
gcacaggtgggccaggcctacgtggggcggccctgtctgcaccctgacgacctccactgc
ccatctagtgcccctaaccatcacagcaggcaggctcccaatgtggctcaggagttgagc
gggggctgccatggcttctcccacaagttcatgcactggcaggaggaactgctgctggga
ggcatggccagagacccccaaggacagctgctgagggcagaggccctgcagagcaccttc
ctgctgatgagtccccgccagctctacgagcacttccggggcgactaccagacacacgac
atcggctggagcgaggagcaggccggcacggtgctgcaggcctggcagcggcgcttcgtg
cagctggcgcaggaggccctgcctgggaacgcgtcccagcagatccacgccttctcctcc
accaccctggatgacatcctgcacgccttctctgaagtcagcgctgcccgcgtggtggga
ggctacctgctcatgctggcctacgcctgcgtgacaatgctgcggtgggactgtgctcag
tcccagggtgctgtgggcctcgccggggtgctgctggtggccctagcggtggcctcgggc
ctcgggctctgcgccctgctcggcatcgccttcaatgccgccactacccaggtgctgccc
ttcttggcactgggcattggcgtggatgacatattcctgctggcacatgccttcacagag
gctccacctggcacccctctccaggagcacacaggtgagtgtctgcagcgcacaggcacc
agcgttgcactcacgtccatcaacaacatggtcgccttcttcatggctgccctagttccc
atccctgcactgcgggccttctccttgcaggcggcagtagtggttggctgcaactttgca
gccgtgatgcttgtcttcccagcggtcctcagcctggacctgcaccggcgccactgccag
cgccttgatgtgctctgctgcttctctagcccctgctctgctcgggtgattcagattctg
ccccaggagctgggggataggacagtaccagtgggcattgctcacctgactgccactgtt
caggcatttgcgcactgtgaagccagcagccagcatgtggtcaccatcctgcctccccaa
gcccacctggtgcccccaccttctgacccactggcctctgagctcttcagcccaggaggg
tcaacacgggaccttctaggccaggaggaggggacaaggcagaaggcagcctgcaagtcc
ctgccctgcgcccgctggaatcttgcccatttcgcccgctctcagtttgcacccttgctg
ctccagtcccacaccaaggccatggtgctggtactttttggggctcttctgggcctgagc
ctctatggatcgaccttggtgcaggatgggctggccctgacagatgtggtgcctcggggc
accaaggagcatgccttcctgagcgcccagctcaggtacttctctctgtacgaggtggcc
ctggtgacacagggtggctttgactacgcccactcccaacgcgccctctttgatctgcac
cagcgcttcagttccctcaaggcagtgctgcccccaccggccatgcaggcaccccgcacc
tggctgcactattaccgcaactggctacagggaatccaggctgcgtttgaccaggactgg
gcttctgggcgcatcacccaccactcataccgcaatggctctgaggatggggccctagcc
tacaagctgctcatccagaccggggatgcccaggagcctcttgatttcagccagctgacc
acaaggaagctggtggacaaggacgggctgattccacctgagctcttctacatggggctg
accgtgtgggtgagcagtgacccgctgggtctggcagcctcacaagccaacttctacccc
ccacctcccgagtggctgcatgacaagtacgacaccaccggggagaaccttcgcatcccg
gcggcccagcctctggagtttgcccagttcccctttctactgcacggactccagaagact
gcagacttcgtggagaccattgagggggcccgggcagcgtgtgccgaggcaggccaggct
ggggtgcgcgcctaccccagcggctcccccttcctcttctgggagcagtatctgggcctg
cggcgctgcttcctgctggcagtctgcatcctgctggtgtgcactttcctcgtctgtgcc
ctgctgctgctcaacccctgggcagcttccctcatagtactggtcctggcagtgatgacc
gtggagctctttggcatcatgggtttcctgggcatcaagctgagcgccatccccgtggtg
atccttgtggcgtctgtaggcattggtgtcgagttcacggtccatgtggctctgggcttc
ctgacctcccagggtagccggaacctccgggctgcccgggccctagagcacacactggcc
ccggtgaccgatggggccgtctccacattgctgggtctgctcatgcttgctggttccaac
tttgacttcattgtaaggtacttcttcgtggtgctgacagtactcacactcctaggcctc
ctccatgggctcgtgctgctgcctgtgctgctgtccatcctgggccccccaccagaggtg
gtacagatgtacaaggagagcccggaggtcctgagcccaccagctgcacaaggaggaggg
ctcaggtggggggtagcccccacccttccccagagctttgccagagtgactacctccatg
accgtggccctccgcccacccccactgcctggtgcctacatccacccggcctctgaagag
cctacttggtcccctgctgccacaccagctgccagtggctccagcaacctcagttctagg
ggaccatgtccagccacctga
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