KEGG   Orcinus orca (killer whale): 101281639
Entry
101281639         CDS       T05247                                 
Symbol
SNX27
Name
(RefSeq) sorting nexin-27 isoform X1
  KO
K17936  sorting nexin-27
Organism
oor  Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:oor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oor04131]
    101281639 (SNX27)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:oor04990]
    101281639 (SNX27)
Membrane trafficking [BR:oor04131]
 Protein recycling
  Others
   Others
    101281639 (SNX27)
Domain-containing proteins not elsewhere classified [BR:oor04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   101281639 (SNX27)
SSDB
Motif
Pfam: PX PDZ RA PDZ_6 RA_2 SNX17-27-31_F1_FERM PDZ_2 USP7_C2 SNX17_FERM_C UBX RBD RA_3 SNX17-31_F2_FERM DarA_N Ras_bdg_2 Pept_S41_N_bact OTU1_UBXL
Other DBs
NCBI-GeneID: 101281639
NCBI-ProteinID: XP_004285264
LinkDB
Position
1:complement(103381665..103466976)
AA seq 543 aa
MADEDGEGIHPSAPHRNGGGGGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNVR
GQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVV
DLIRAGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGE
KFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRG
LEEYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTD
QVYQAIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIR
KWLFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNML
RTCEGYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWD
TDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQRD
VAT
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggcggatgaggacggggaagggattcacccctcagcccctcacaggaacggaggtggc
ggcggcggcggcggtggggggtctgggctgcactgcgccgggaacggcggcgggggaggc
ggcggcccgcgggttgtgcgcatcgtcaagtccgagtccggctacggcttcaacgtgcgg
ggccaagtgagcgagggcgggcaactgcggagcatcaacggggagctgtacgcgccgctg
cagcatgtgagcgccgtgctgcccgggggggcggccgaccgggccggggtgcgcaagggg
gaccgcattctggaggtgaacggcgtgaatgttgagggggcgacacacaagcaggtggtg
gacctgatccgagcaggcgagaaggaattgatcttgacagtgttatctgtacctcctcat
gaggcagataacctagatcccagtgacgactcgttgggacagtcattttatgattacaca
gaaaagcaagcagtgcccatatcggtccccacatacaaacatgtggagcagaatggtgag
aagtttgtggtatacaatgtttacatggcagggaggcagttgtgttctaagcggtaccgg
gagtttgccatcctacaccagaacctgaagagagagtttgccaactttacatttccccga
cttccagggaagtggccattctctttatcagaacagcaattagatgcccgacgtcggggg
ttggaagaatatctagaaaaagtgtgctcaatacgagtcattggtgagagtgacatcatg
caggaattcttatcagaatcagatgagaactacaatggtgtgtctgacgtagagctgaga
gtagcattaccagatggaacaacagttacagtcagggttaaaaagaacagtactacagac
caagtatatcaggctattgcagcaaaggttggcatggacagtacgacagtgaattacttt
gccttatttgaagtgatcaatcattcctttgtacgtaagctggcacctaatgaatttcct
cataaactctacgtccagaattacacatcagctgtgccaggcacctgcctaaccattcga
aagtggctttttacgacagaagaagaaatcctcttaaatgacaatgaccttgctgttacc
tacttctttcatcaggctgttgatgatgtgaaaaaaggttacatcaaagcagaggaaaaa
tcctaccaattacagaagctgtatgaacaaaggaaaatggtcatgtacctcaacatgcta
aggacttgtgagggctacaatgaaatcatcttcccccactgtgcctgcgactccaggaga
aaggggcatgttatcacagccatcagcatcacgcactttaaactgcatgcctgcactgaa
gaaggacagctggagaaccaggtaatagcatttgaatgggatgagatgcaacgatgggat
acagatgaagaaggaatggccttctgttttgaatatgctcgaggagagaagaagcctcga
tgggttaaaatcttcacaccatatttcaattacatgcatgaatgcttcgagagggtgttc
tgcgagctcaagtggagaaaagagaacattttccagatggcgaggtcacagcagagggat
gtggccacctag

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