Orcinus orca (killer whale): 101282111
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Entry
101282111 CDS
T05247
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101282111 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101282111 (EXOSC8)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101282111 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
CUB_M02D8_5_4th
Motif
Other DBs
NCBI-GeneID:
101282111
NCBI-ProteinID:
XP_004282280
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All DBs
Position
18:complement(66000709..66006785)
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AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSIGTADGSSLVKLGNTTVIC
GIKAEFGAPPTDAPDKGYVVPNVDLSPLCSWRFRSGPPGEEAQVASQFIADVIENSQVIQ
KEDLCISPGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEETASAEVN
LKKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEENLATGTLTVVMDEEGKLCCLHKPGG
SGLTGAKLQDCMSRAVTRHKEVKKLMDEVFKSMKPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggattcaaaactgtggaacctctggagtattacagaagatttttgaaagag
aattgccgtcctgatggaagagaacttggtgaattcaggaccacaactgtcaacataggt
tcaattggtactgcagatggttcttctttagtgaagctgggaaacactacagtaatttgt
ggaattaaagcggaatttggagcaccaccaacagatgcccctgataaaggatatgttgtt
cctaatgtggatctatcacctctgtgttcctggagatttcggtctggacctcctggagaa
gaggcccaggtggccagccagttcattgcagatgtcattgaaaattcacaggtaattcag
aaagaggacttgtgtatctctccaggaaagcttgcttgggttctatactgtgatctcatt
tgcctcaaccatgatggaaacattttggatgcttgcacctttgctttgttagcagcttta
aaaaatgtacagttgcctgaagttactataaatgaagaaactgcttcagcagaagttaat
ttaaagaagaaaagttatttgaatattagaactcatccagttgcaacttcctttgctgtg
tttgatgacactctgcttatagttgaccctactgaagaggaggaaaacctggcaactgga
accttaacagtagtaatggacgaggaaggcaagctatgttgtcttcacaaaccaggtgga
agtggactgactggagctaaacttcaagattgtatgagccgagccgttacaagacacaaa
gaagtaaaaaaactgatggatgaagtatttaagagtatgaaacccaaataa
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