KEGG   Orcinus orca (killer whale): 101282278
Entry
101282278         CDS       T05247                                 
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
oor  Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:oor00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oor04812]
    101282278 (KATNB1)
Cytoskeleton proteins [BR:oor04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     101282278 (KATNB1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Katanin_con80 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Aladin NBCH_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_VPS8 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_RIG_1st RMC1_N Beta-prop_WDR19_1st WDR54 eIF2A Beta-prop_IP5PC_F PROPPIN Beta-prop_LRRK2 Beta-prop_NWD2_C VPS8_N Tricorn_2nd Beta-prop_WDR35_TULP_N Beta-prop_pof12 Beta-prop_ACSF4 Ge1_WD40
Other DBs
NCBI-GeneID: 101282278
NCBI-ProteinID: XP_012395024
LinkDB
Position
20:complement(27196856..27220921)
AA seq 655 aa
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSSVSSYVV
DLTRVTRTGTVAPDPMQDSQPPAQQPPHPSAPLRRIYERPGATGSEPQRVKQNSESERRS
PSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDVATAKEAAKP
SPAMDVQFPVPKLEVLSRPPVVTSTPAPKAESAIIPATRNEPIGLKASDFLPAVKIPQQA
ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDMLAAP
PTVGVDISREERLHKCRVCYKQLRSISGLVKSKSGLSGRHGSAFRELHLLMASLD
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggccacccctgtggtcaccaagacggcctggaagttacaggagatcgtggcccatgcc
agcaacgtatcctcactggtgctgggcaaagcctcgggccggctgctggccacaggcggg
gatgactgccgcgtcaacctgtggtccatcaacaagcccaactgcatcatgagcctgacg
ggtcacacgtccccagtggagagcgtacgtctcaacacccctgaggagctcattgtggcc
ggttcccagtcgggctccatccgcgtctgggacctggaagctgccaaaatccttcgcaca
cttatggggcacaaagccaacatctgcagcctggatttccacccgtatggcgagtttgtg
gcctcgggttcccaggacacgaacatcaagctctgggacatcaggaggaaaggctgtgtg
ttccgatacagggggcacagccaggccgtgcggtgtctccggttcagccccgacgggaag
tggctggcatcggccgcagatgaccacacggtgaagctctgggatctgactgctggcaag
atgatgtccgagttccccggccacacagggcctgtcaacgtggtggagtttcaccccaac
gagtacctcctggcttctggcagctctgacaggaccatccgtttctgggatctggagaaa
ttccaggtggtgagctgtatcgaaggggagccagggcctgtcaggagcgtcctcttcaac
cccgatggctgctgcctgtatagtggctgccaggactcactgcgcgtctacggctgggag
cccgagcgctgctttgacgtggtcctcgtcaactggggcaaggtggccgacctggccatc
tgcaatgaccagctgataggcgtggccttctcccagagcagcgtctcctcttacgtggtg
gacctgacgcgggtcaccaggacgggcacggtagccccggaccccatgcaggacagccag
cccccggcacagcagccgccacaccccagcgccccgcttcggcgcatctacgagcggccc
ggcgccaccggcagcgagcctcagagggtgaagcagaactcagagagcgagcgccgcagc
cccagcagcgaggatgaccgggatgagcgggagtctcgggcggagatccagaacgccgag
gactacaacgagatcttccagcccaagaacagcatcagtcggacgccaccccgaagaagt
gagcccttcccagcacccccagaggatgacgtggccacagccaaggaggcagcaaagccc
agcccagccatggacgtgcagttcccggtgccaaaactcgaggtcctgtcccggccccca
gtcgtcacttccacccccgcacccaaggccgagtctgccatcatccctgccacccggaac
gagcccatcggactgaaggcctctgacttcctgcctgccgtgaagatcccccagcaggcg
gagctggtcgacgaggatgccatgtcacagatccgcaaaggccatgacaccatgtgtgtc
gtgctcaccagccgccacaagaacctggacaccgtgcgggccgtgtggaccacgggtgac
atcaagacgtcggtggactcggccgtggccatcaatgacctgtccgtggtcgtggacctc
cttaacattgtcaaccagaaagcctccctgtggaagctggacctatgcaccaccgtcctg
ccacagatcgagaagcttctgcagagcaagtatgagagctacgtccagacgggctgcacc
tctctgaagctgatcctgcagcggtttctgcccctgatcacagacatgctggcggccccg
cccaccgtgggtgtggacatcagccgggaggagaggctgcacaagtgccgggtctgctac
aagcagctcaggagcatcagtggcctcgtcaagagcaagtcgggcttgagcggccgccac
ggcagtgccttccgcgagctgcacctgctcatggccagtttggactga

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