Orcinus orca (killer whale): 101282423
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Entry
101282423 CDS
T05247
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X20
KO
K13210
far upstream element-binding protein
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101282423 (FUBP1)
03041 Spliceosome [BR:
oor03041
]
101282423 (FUBP1)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101282423 (FUBP1)
Spliceosome [BR:
oor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101282423 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
101282423
NCBI-ProteinID:
XP_012392228
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All DBs
Position
1:144746494..144797773
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AA seq
665 aa
AA seq
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MADYSTVPPPSSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGY
GGQKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQSRS
VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQS
AKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM
VMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGID
VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEII
TDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETI
KSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVP
HGPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQ
QAPPDPAKTGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQGDQQNPAPAGQ
VDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPP
APQGQ
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcagattattcaacagtgcctccaccctcctctggctcagctggtggtggaggcggc
ggcggtggtggtggaggagttaacgatgctttcaaagatgcgctgcagagagcccgacag
attgcagcaaaaattggaggtgatgctggtacatcactgaattcaaatgactatggttat
gggggacagaaaagacctttggaagatggagatggctcttggacaagtccgagcagtaca
acacactgggagggaatgccctctccttttaaagatcagccagatgctaagaaagttgct
cctcaaaatgactctttcggaacacagttaccaccgatgcatcagcagcaaagcaggtct
gtaatgacagaagaatacaaagttccagatgggatggttggatttataattggcagagga
ggtgaacagatctcacgcatacaacaggaatctggatgcaaaatacagatagctcctgac
agtggtggccttccagaaaggtcttgtatgttaactggaacccctgagtctgtccaatca
gcaaaacggttactggaccagattgttgaaaaaggaagaccagcccctggcttccatcat
ggtgatgggccaggaaatgcggttcaagaaatcatgattccagctagcaaagcaggatta
gtcattggaaaggggggagagactattaaacaacttcaggaacgggctggagttaaaatg
gttatgatccaagatggacctcagaacactggtgctgacaaacctcttaggattacaggg
gacccatacaaagttcaacaagccaaggaaatggtgttagaattaattcgtgatcaaggt
ggtttcagagaagttcgaaatgagtatgggtcaagaataggaggaaatgaaggaatagat
gtccccattccaagatttgctgttggcatcgtaataggaagaaatggagagatgattaaa
aaaatacaaaatgatgctggtgttcgaattcagtttaagccagatgacggaacgacacca
gatagaatagcacaaataacaggacctccagaccgatgtcaacatgctgcagaaattatt
acagaccttctccgaagtgttcaggctggtaatcctggtggacctggacctggtggtcga
ggaagaggtagaggtcaaggcaactggaacatgggaccacctggtggactacaggaattt
aatttcattgtaccaactggaaaaactggattaataataggaaaaggaggtgaaaccata
aaaagcataagccaacagtctggtgcaagaatagaacttcagagaaatcctccacctaat
gcagatccaaatatgaagttatttacaattcgtggcactccacagcaaatagactatgct
cggcaactcatagaagaaaagattggtggcccagtaaatcctttagggccacctgtaccc
catgggccccatggtgtcccaggcccccatgggcctcctgggccccctgggcctggaact
ccaatgggaccatataaccctgcaccttataatccgggaccacctggccctgctcctcat
ggtcctccagccccttatgctccccaggggtggggaaatgcgtatccacattggcagcaa
caggcccctccagatccagctaaaacaggaacagatccaaattcagcagcttgggctgct
tattatgctcactattatcaacaacaagcacagccaccgcctgcagctcctgccggtgca
ccaactacaacccaaaccaatggacaaggagatcaacagaatccagctccagctggacag
gttgattataccaaggcttgggaagagtactacaagaaaatgggtcaagcagttcctgcc
cctactggtgctccaccaggtggtcagccagattatagtgcagcctgggctgagtactat
agacaacaagcagcctactacgcccagacaagtccccagggaatgccacagcatcctcca
gcacctcagggccaataa
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