Orcinus orca (killer whale): 101282556
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Entry
101282556 CDS
T05247
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X4
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oor04990
]
101282556 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
oor04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
101282556 (LIMCH1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
101282556
NCBI-ProteinID:
XP_004268366
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All DBs
Position
4:complement(88952917..89294363)
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AA seq
1058 aa
AA seq
DB search
MACAALGLEALQPLQPEPPPEPAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKSLDYS
RKLKNVLVTIYWLGKAANSCASYSGTTLNLKEFEGLLAQMRKETDDVESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEYRKSWST
ATSPLGGERPFRYGPRTPVSDDAESTSMFDMRCEEESKVQPHSRARQEQLQLINNQLREE
DDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKLLAGEDGMSERRKSIKTYREIVQEKE
RRERELHEAYKNARSQEEAERILQQYIERFTISEAVLERLEMPKILERSHSTEPNLSSFL
NDPNPMKYLRQQSLSPPKFTATVETTIARTSVLDASMSAGSGSPSKTVTPKAVPMLTPKP
YSQPKNSQEVLKTFKVDGKVTMNGETVHVDEEEKERECPPVALAPSLTKSQMFEGVARVH
GSPMELKQDNSSIEINIKKPSSLPQELTATTEETETNSQEDENDGEKTEKGNTEVASSEP
QCFTSTVTRSSPTVAFVELSSSPQVKNEVPEEKDQKKPENEMSGKVELVLSQKVVKPKSP
EPEATLTFPFLDKMPESSQLPLPNLSSQVDSPSSEKSPVTTPLKLWAWDPEEERRRQEKW
QQEQERLLQERYRKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTISSSSAD
QLSTSSSVTEGSGTMNKMDLENCREEEQKTRQKKPFQGDNSGSLLKTKEGDPLEEKGSLT
QGVLTHSENPALKGIYQDLQLDTEAGASPCGMNPQLAQDPSRNQQVSNPPMHILEDVKPK
TLPLDKSINHQIESPSERRKSISGKKLCSSCGLPLGKGAAMIIETLNLYFHIQCFRCGIC
KGQLGDAVSGTDVRIRNGLLNCNDCYMRSRSAGQPTTL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtgccgctctcggtctggaagctcttcagcccctgcagcctgagccgcccccc
gagcccgcgttctccgaggcgcagaagtggatcgagcaagtaactggcagaagttttggt
gataaagattttcggacagggttagaaaatggaatccttctctgcgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcaggattggac
aatatcatattattcttgagaggttgtaaagagctcggccttaaagaatctcaacttttt
gacccgagtgacctacaggatacgtccaacagagtaacagtcaagagccttgattatagc
aggaagctgaaaaatgtactagtgactatttactggctgggcaaagcagcgaatagctgt
gcatcttacagcgggacaacgctaaacctgaaggagttcgaaggcttgctggctcagatg
aggaaggagactgatgacgttgagagccctaaacgtagtattcgagacagtggctacatc
gactgctgggactctgagcgcagtgactccctctctccccctcgacatggcagagatgat
tccttcgatagcctggattcctttggctcccgttcccggcagacaccttcgccagatgta
gtcctcaggggaagcagtgatgggagaggaagcgactctgaatccgacttgccccatcgg
aagctgccggatgtgaagaaggatgacatgtctgcgaggcggacttcccacggtgagcca
aaatcagcagtgccttttaaccagtacctccccaacaaaagcaaccagacagcctacgtc
cccgcacctctgagaaagaagaaagcagagcgagaggaatatcggaagagctggagtact
gccacctcccccctgggtggggagaggcccttcagatacggaccgagaactcctgtgtct
gatgacgcagagagcacgagtatgttcgacatgcggtgtgaggaggagtccaaggtgcag
ccgcacagcagggcccgccaggagcagctgcagctgataaacaaccagctgcgggaagag
gatgacaaatggcaagatgacctggctcgttggaagagccgtagaagaagtgcttctcag
gacttaatcaagaaagaggaagaaaggaaaaaaatggagaagttactggctggagaggat
gggatgagtgaacgaaggaaaagcatcaaaacctacagggaaattgtccaggaaaaggag
cggagagagagggagttgcatgaggcatacaagaatgcacggtcccaggaggaggcggaa
aggatcctccaacagtacatcgagaggttcaccatcagcgaagctgtccttgaacgcttg
gagatgccaaaaattctggaaagaagccattcaacagagccaaacttatcctccttcctg
aatgaccccaaccccatgaaatacctgcggcaacagtcactgtctccacccaaattcact
gccaccgtggaaaccaccatcgctcgtaccagtgtactggatgccagcatgtcagcaggc
agtgggtctccaagcaaaactgtcactcccaaagcagtgcctatgctgacacccaagcct
tactcccagcccaaaaactctcaagaggtcctgaagaccttcaaggtagatgggaaagtc
accatgaatggagagacggttcacgttgacgaggaggagaaggaaagagagtgtcccccc
gtggcacttgccccctcgttgaccaaatcccagatgtttgaaggtgtggccagagtgcat
gggtcccccatggagctgaaacaagacaacagtagcattgagatcaacataaagaagcca
agttctcttccccaagagctgacggcaacgactgaagaaactgaaacaaacagtcaagaa
gatgagaatgatggtgaaaaaacagaaaaagggaatacagaagttgcctcatcagagcca
cagtgttttacatcaactgtgactcgatccagcccgaccgtggcctttgtggagctttcc
tccagcccccaggtgaagaacgaggtgccagaagagaaagaccagaagaaaccggaaaac
gaaatgagtggaaaggtggaactggtgctgtcacaaaaggtggtaaagccaaaatctcca
gaaccagaagcaaccctgacgtttccatttctggacaaaatgcctgaaagcagccaatta
cctttgccaaatctcagttctcaagtggattctccaagcagtgaaaagtcacctgtaact
acgcctttgaagttgtgggcttgggacccggaagaggaacgcaggcgacaggaaaaatgg
caacaggagcaggaacgtttgctccaggagagataccggaaggaacaggacaagctgaag
gaagagtgggaaaaggcccaaaaggaggtggaagaggaagagcgcagatactatgaggag
gagcgcaaaataattgaggacactgtagttccatttactatttcttcaagttctgcagac
cagctgtctacatcctcctctgtgactgaaggcagtgggacaatgaataagatggacttg
gaaaactgtcgagaggaagaacaaaagacaagacagaagaaaccattccagggggataac
agtggctcattgcttaagactaaggaaggtgacccactggaggaaaagggcagcctaact
caaggagtcttgactcattctgagaaccctgcattgaaaggaatatatcaggacctccag
ctggatacagaagctggggcctcaccctgtgggatgaacccacagctagctcaggatcca
tcccggaatcagcaggtatcaaacccaccaatgcacattttagaagatgtgaagccaaaa
accctcccattggacaaaagcattaatcatcagattgagtctccgagtgaaagacggaag
tctataagtgggaagaagctgtgctcttcgtgtgggcttccattgggtaaaggagctgca
atgatcatcgagaccctcaatctctattttcacatccagtgctttaggtgtggaatttgt
aaaggacagcttggagacgcagtgagtgggacggatgttaggattcgaaatggtcttcta
aactgtaatgactgctacatgcgatccagaagtgctggccaacccacaacattgtga
DBGET
integrated database retrieval system
