Orcinus orca (killer whale): 101282936
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Entry
101282936 CDS
T05247
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oor03016
]
101282936 (TRMT13)
Enzymes [BR:
oor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
101282936 (TRMT13)
Transfer RNA biogenesis [BR:
oor03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
101282936 (TRMT13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
101282936
NCBI-ProteinID:
XP_004263124
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All DBs
Position
1:complement(124477910..124503458)
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AA seq
481 aa
AA seq
DB search
MAASAPTPHGTGFPAEGRCGYYVEKKKRFCRMVVAAGKRFCGEHAGAAEEENARKRILCP
LDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDETEIPEQLVPISFLSEEQME
NLIKKLRKASEGLNSTLKDQIMSHPALHDALNDPKNGDSATKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNKIPLLSKEKLPVVGIGKHLCGVATDLALRCLVETYAASCEERNEEPLAKRVK
NDKTEKEINTLAKEGNEKNIPEKWTPVAGIVIALCCHHRCDWRHYVGKEYFRALGLGAVE
FHYFQRMSSWATCGMQKTSLEASNISTKRKDKQNDGSEEHDDGGYRITDDSTESLPGFLN
VEEKKKIGHLCKLLIDQGRINYLQQKGFNPALQYYTDPLVSLENVLLTALPNHSSSPETT
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctgcgccgacgccgcacggaactggctttccagcagaggggcgatgtggc
tactatgtggaaaagaagaagcgcttctgcaggatggtggtggcagcaggaaaaaggttc
tgtggtgaacacgctggagccgcggaggaagaaaatgctcggaaaagaatcctgtgtcct
ttagatccaaaacacacagtatatgaagatcaactagcaaaacatttgaaaaaatgtaac
tcaagagagaagccaaaacctgacttctttattcaagatattaatgcaggcttaaaagat
gaaacagaaatacctgaacaattagttccaatttcttttctctctgaagagcagatggaa
aacttaattaagaaactgagaaaagcaagtgagggtttgaactctacacttaaagatcaa
attatgtcccatccagcgttgcatgatgcccttaatgaccctaaaaacggtgattctgca
accaaacatctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgctttgttgagtttggagcaggaaagggaaaattatctcattgggtt
gatattgccttaaaagatgctgaaaaagttcacttcatcctagtagaaaaggtgaccaca
agattcaaggtagatggcaaacacagaaagaaaaattcagtgtttgagagacttcaaatt
gatattcagcacctgtgtttgaacaagattcctttgctaagcaaagaaaaactacctgtg
gtaggaattggaaaacatctgtgtggtgtggcaacagatcttgcattacgatgtttggtt
gaaacctatgctgccagttgtgaggaaaggaatgaagaacctttagccaaacgcgtaaag
aatgataaaacagaaaaagaaattaacactttggccaaggaaggaaatgaaaaaaatatc
ccagagaagtggacccctgtggctggcattgttattgcactctgttgtcaccacaggtgt
gattggagacattatgtgggcaaagaatatttcagggctctaggccttggagcagtggaa
ttccactatttccagcgaatgagtagttgggcgacttgtgggatgcaaaaaacatctttg
gaagcttcaaatatctccacaaaaagaaaagataaacagaatgatggcagtgaagagcat
gatgatggaggatacagaatcacagatgacagcactgagagtttgcctgggtttcttaat
gttgaagaaaagaagaaaatagggcatctttgtaaattgctgattgaccaaggccgaatc
aactatttacagcagaaaggattcaatcccgctttacagtactatacagaccctctggtg
tctttggaaaatgtattgttaactgctttaccaaatcattcttcatcaccagaaacaact
gcttaa
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