Orcinus orca (killer whale): 101282977
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Entry
101282977 CDS
T05247
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X7
KO
K20225
capicua transcriptional repressor
Organism
oor
Orcinus orca (killer whale)
Pathway
oor05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101282977 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101282977 (CIC)
Transcription factors [BR:
oor03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101282977 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101282977
NCBI-ProteinID:
XP_004271284
LinkDB
All DBs
Position
20:complement(47606692..47633578)
Genome browser
AA seq
1608 aa
AA seq
DB search
MYSAHRPLVPASGAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQ
PASHLVASNQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPESPGPGPPHTLGVVEPG
KGPLPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKE
RDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA
LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKEPRERSM
SETGTAAAPGVSSELLSVTAQTLLSSDTKPPGSSSCGAERLHTVGGPGSARPRAFSHSGV
HSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFAAPGEGGTLAASGRPPLLP
TRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFSTTDIDLKCKERVTDSESGDSS
GEDPEGSKGFGRKVFSPVIRSSFTHCRPSLDPEPPGPPDPPAGFGKGYGPTPSSSSSPAS
SSASAATSFPLGSGTFKAQESGQGSTTGPLRPPPPGTGGPATPKATRFLPTDPATFRRKR
PESVGGLEPPGPSVIAAPPSGGGSVLQTLVLPSNKEEREGSGARMPSAPAPSLAYGAPAA
PLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPNDTAGARTETVAGSRAPGGSP
LGVSLVYSDKKSGAATSTASHLVAGPLLGTVGKAPATVTNLLVGAPGYGAPAPPAVQFIA
QGGPGSGTAAGSGAGAGSGPNGPMPLGILQPGPLGKAGGITQVQYILPTLPQQLQVAPAP
APAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPPKAQS
VSPVQAPPPGGSAQLLPGKVLVPLATPSMSVRGGGAGQPLPLVSPPFSVPVQNGAQPPSK
IIQLTPVPVSTPSGLVPPLSPATLPGPASQPQKVLLPSSTRITYVQSAGGHALPLGTSPA
SSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQVGVSPVPSPQLPPT
CAAPSGPVITAFYPGSPVPTSSAPLAQPSQAPPGLVYTVATNTTPPAATILPKGPPAPAT
ATPAPTSPFPSATAGSMTYSLVAPKAQRPTPKAPQKVKAAIASIPVGSFEAGAPGRPGPA
SRQPLEPGPAREPPASESELEGRPTTPAPPLPPETWAPPARSSPPPPPPAEERTSAKGPE
TMASKFPSSSSDWRVPGLGLESRGEPPTPPSPAPAPAPAPGSSGSSSEGSSGRAAGDTPE
RKEAASVGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPSPTLQSLA
TSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFD
RTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADI
FPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPPTVTAAAPVPTPSPAGGPDPT
SPGSDSGTAPAAPPLPPPPEPGPGQPGWEGPPQPSPPPSGPSTAATGR
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagcccacaggcccctggtgcccgcgtccggcgcggcctcccgtggcctcggc
atgttcgtgtggacgaacgtggaacctcgctctgtggccgtgttcccctggcattcctta
gtccccttcctggcccccagccagcctgacccctccgtgcagccaagtgaggcccagcaa
cctgctagccacctagtggcctccaaccagagcaaagagcctgctgagtcggcagctgtt
gctcacgagcagccaccaggcgggacggggaatgctgaccccgggcggccccctggagct
acatgccctgagagcccagggcccggacccccccacactttgggggtggtggaacctgga
aagggcccccttcccacgacggaggaggaggcccctggtcctccaggagagccccggctg
gacagtgagacagagagtgaccacgacgatgccttcctctccatcatgtctcctgagatc
cagttgcctctgccgcctgggaaacgccggacgcagtccctcagcgccctgcccaaggaa
cgagactcatcttcagagaaggatggacgcagccccaacaagagggagaaggaccatatc
cggcggcccatgaatgccttcatgatcttcagcaagcggcaccgggccctggtccaccag
cgtcaccccaaccaggacaaccggaccgtcagtaagatcctgggcgagtggtggtacgct
ctggggcccaaggagaagcagaagtaccacgacctggccttccaggtgaaagaggcccac
tttaaggcccacccagactggaagtggtgcaacaaggaccggaagaagtccagctcagag
gccaagcctacaagcctggggctggcaggggggcacaaggagccaagggagcggagcatg
tcggagacaggcaccgccgctgcccctggagtgtcctcggagctcctgtccgtcacagcc
cagacactcttgagctcggacaccaagcctccggggagcagctcctgtggggcagaacgt
cttcacacagtcggcggacctggctcagcccggccccgagccttctcccacagcggggtc
cacagcctggatggcggggaagtagacagccaggcactacaggaactgactcagatggtg
tctggccctgcatcctactctggcccaaagccttccacccagtatggggctccaggcccc
tttgcggcccccggtgagggaggcactctggcagccagtgggcggcccccactgctgccc
acccgggcctcccgttcccagcgtgcagccagtgaggacatgaccagtgacgaggaacgc
atggtcatctgtgaggaggaaggggatgatgatgtcattgctgacgatggcttcagcacc
actgacattgacctcaagtgcaaggagcgggtgaccgacagcgagagcggagacagctct
ggggaggacccagagggcagcaagggatttggtcggaaggtgttctcgcctgtgatccgt
tcctcctttactcactgccgtccatcgctggaccctgagcccccagggcccccagaccca
cctgccggcttcggcaaaggctacgggcccaccccatcctcctcatcctcgcctgcctcc
tcctcggcctcagcagccacctccttcccgctgggctcagggaccttcaaggcccaggag
tcaggtcagggcagcacaacaggtcccctacggcccccaccccctggaactgggggccca
gcaacgcctaaggccacccggtttctccccacggatcctgccaccttccggcgcaagaga
cctgaaagcgtggggggcctggagccaccaggcccctcagtcattgcggcacctcccagc
gggggaggaagtgttctgcagacactggtcctgccctcaaacaaggaggaacgggagggc
agcggagctcgcatgccctcggccccagccccgtcgctggcctatggggccccagcagcc
cccctgtcccgcccggccgccaccatggttaccaatgtggtgcggcctgtcagcagcact
cctgtgcccatcgcctctaagcctttccccacttctggccgggcagaagcgtctccaaat
gacacggccggtgccaggactgagacagtcgctgggtccagggcgcctgggggctcccca
ctgggcgtcagcttagtgtattcagacaagaagtcgggagcagccacctcaacagcctca
catctggtggctggacccctactgggcactgtggggaaggcgcctgccactgtcaccaac
ctgctggtgggcgccccgggctatggggccccagcgcccccagctgtccagttcattgcc
caggggggccctggcagcgggacggctgcgggctcaggagcaggtgctgggagtgggccc
aatgggccaatgcccctgggcatcctgcagccaggtcccctgggcaaggctgggggaatc
acccaggtgcagtatattctgcccacgctgccccagcaacttcaagtggcgcctgcccca
gcaccagcccctgggaccaaggcagcggctcccagcggccctgcacccaccaccagcatc
cgtttcaccctcccgccgggcacctccaccaacggcaaagtcctggctgccaccgcaccc
actcctggcatccccatcctgcagtccgtaccctccgccccgcccccgaaagcccagtca
gtttctcctgtgcaggccccgcccccgggtggctcagcccagctgctacctgggaaggta
ctagtgcccttggccacccctagcatgtcagtgcggggaggaggggccggccagccgctg
cccctggtgagcccacccttctcagtacctgtgcagaacggtgctcagccacccagcaag
atcatccagctaactccggtgcctgtgagcacacccagcggcctggtgccgcccctcagc
ccggccacgctccccggacccgcctctcagcctcagaaggttctgctgccctcctccacc
aggatcacctacgtgcagtcagcaggcgggcatgcgctgcccctgggtaccagtcctgcc
tccagtcaggctggaacagtcacctcgtacggacccacgagctcagtagccctaggcttc
acctcgctggggcccagcggccccgccttcgtgcagcccctgctttcaggccaagcccca
ttgctggctcctggccaggtgggcgtgtcacccgtgcccagcccccagctgcctcccacc
tgcgcagcccccagtggtcccgtcatcacagcgttctaccctggcagccccgtacccacc
tcctcagcacccctggcccagccatcccaggctcccccaggcctggtctacaccgtggcc
accaacaccaccccacctgctgccaccatcctgcccaagggcccaccggcccccgccact
gccaccccggcccctaccagcccttttcctagtgccacagcaggctccatgacctacagt
ttagtggcccccaaggcccagcggcccacccccaaggccccccagaaagtgaaggcggcc
atcgccagcattcctgtgggctcctttgaggcaggtgcccctgggcggccaggccctgcg
tcccggcagccgttggagcccggcccagctcgtgagccccctgcatctgagtcagagctt
gaggggcggccaacaacaccagcccctccgctgcccccagagacctgggctcccccggcc
cggagcagtcccccgccgcccccacctgctgaggagcggaccagtgccaagggccctgag
accatggccagcaaattccccagctcatcttcagactggcgtgtccccgggctgggcctg
gagagccgaggggagcctcccacccctcccagcccggccccggctccagccccagcccct
ggtagcagcggcagcagcagtgagggcagcagtgggagggcagctggggacacccccgag
cgcaaggaggcggctagtgtcggcaagaaggtcaaggtgcggcccccgcccctgaagaag
acctttgactctgtggacaacagggtcctgtcggaggtggacttcgaagagcgctttgct
gagctgcccgagtttcggcctgaggaggtgttgccctcgcccaccctgcagtctctggcc
acctcaccccgggccatcctgggctcctaccgcaagaagaggaagaactccactgacctg
gactcagcccccgaggaccccacctcgcccaagcgtaagatgaggagacgctccagttgc
agctcggagcccaacacccccaagagtgccaagtgcgagggggacatcttcacttttgac
cgtacaggtacagaagctgaggatgtgctcggggagctggaatacgagaaggtgccctac
tcgtcgctgcggcgcaccctggaccagcgccgggccctcgtcatgcagctcttccaggac
catggcttcttcccatcagcccaggccacggcagccttccaggcccgctatgcagacatc
ttcccctctaaggtctgtctgcagctgaagatccgtgaggtgcgccagaagatcatgcag
gcggccactcccacagagcagcccccgggagccgaggcccccctccctggaccgcccccc
actgtcactgctgctgcccctgtccccactcccagccctgctgggggccctgaccccacc
tcacctggctcggactctggcacggccccggctgccccgccattgcctccgcccccagag
ccggggcccggacagcctggctgggaggggcccccccaaccctcaccacccccctctggt
ccctccacagctgccacaggcaggtga
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