Orcinus orca (killer whale): 101283119
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Entry
101283119 CDS
T05247
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04360
Axon guidance
oor04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
101283119 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
101283119 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oor04040
]
101283119 (TRPC4)
Ion channels [BR:
oor04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101283119 (TRPC4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
Motif
Other DBs
NCBI-GeneID:
101283119
NCBI-ProteinID:
XP_033265968
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All DBs
Position
18:65334361..65496356
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AA seq
977 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCVDPLGRTALLIAIENENLELIELLLSCNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLLEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNIISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTVQSAQGTKDSSNSADSDEK
SDNEGSSKDKKKNFSLFDLTTLIHPRSAAIASERHTISNGSALVVQEPPREKQRKVNFVT
DIKNFGLFHRRSKQHAAEQNANQIFSVSEEVARQQAEAPLETNIQLESRGLASRGDLNIP
GLSEQCILVDHRERNTDSLGLQVGKRVCSFKSEKVVVEDTVPIIPKEKHAKEEDCSVDYD
ANLTDMVTHEDYVTTRL
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaagaaatgttaacgccccctacagagaccgcatccctctc
aggatagtccgagcagaatcagagctctcaccctccgagaaagcctacttgaacgctgtg
gaaaagggagattatgcaagtgtcaagaaatccctagaggaagctgagatttattttaaa
atcaatattaattgcgtcgatccacttggaagaactgctctcctcattgcaatcgaaaat
gagaacttggagctcatagaactactcttaagctgtaacgtctatgttggagatgctcta
ttacacgccatcaggaaagaagttgtcggagctgtagagctgttactgaaccacaagaag
cccagtggagaaaaacaggtgcctcctatactccttgataagcagttctctgaattcact
ccagacattacacccatcattttggcagcccatacaaataattacgagataataaaactt
ttggttcagaaaggcgtctcggtgcccagaccccatgaggtccgctgcaactgtgtcgaa
tgcgtgtccagctcggatgtggacagtctccgccactctcgctccagactcaacatctac
aaggccctggccagcccctctctcatcgccctgtccagtgaagacccttttctcacagcc
tttcagttaagttgggagctccaggaactgagtaaggtggaaaatgaattcaagtcagag
tatgaggagctgtcacgacagtgcaaacaatttgctaaggacctactggatcagacaaga
agttcccgcgagctggaaatcattcttaattaccgtgatgacaacagtctcctagaagaa
caaagtggaaatgatctcgcgagactcaaattggccattaagtaccgtcagaaagagttt
gttgctcagcccaactgtcaacagctgctggcatctcgctggtacgatgagtttcccggc
tggaggagaagacactgggccgtgaagatggtgacgtgtttcataataggacttcttttt
cctgtcttctctgtgtgctaccttatagctcccaaaagcccccttggactgttcatccga
aagccatttatcaagttcatctgccacacagcatcctatttgacttttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccatgggtcctgggttttatatggggagaaattaaacaa
atgtgggatggtggacttcaagattacatccacgattggtggaatctaatggattttgtg
atgaactccttatatctagcaacaatctccttgaaaatcgttgcatttgtaaagtacagt
gctcttaatccacgagagtcttgggacatgtggcatcccacgctggtggctgaagcttta
tttgctattgcaaatatattcagttccctgcgactgatctcactgtttactgcaaattct
cacctggggcctctgcaaatatctctgggaagaatgctcctggacattttgaagtttcta
ttcatctactgccttgtgttgctagcatttgccaacggcctaaatcaattgtacttctat
tacgaagaaacgaaagggttaagctgcaaaggcatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgagacactccagtccctgttttggtcaatatttgggctcatcaac
ttatacgtgaccaatgtcaaagcacagcatgaattcaccgagtttgttggtgccaccatg
tttgggacatacaacatcatctctctggttgtcctacttaacatgttaatagctatgatg
aataattcttaccaacttattgctgaccatgcagatatagaatggaaatttgctcggaca
aagctttggatgagttattttgaagaaggaggtaccctgcctactcccttcaatgtcatc
ccaagccccaagtctctctggtacctgatcaaatggatatggacacacctgtgcaagaaa
aagatgagaagaaagccagaaagttttggaacaatagggaggcgagctgctgataattta
agaagacatcaccaatatcaagaagttatgaggaacctggtaaagcgatacgtggctgca
atgattagagatgccaaaactgaagaaggtctgactgaggagaactttaaggaactgaag
caagacatttctagcttccgctttgaagtcctggggttactaagaggaagcaaactctct
acggtccaatctgctcagggcacgaaggattcttctaactccgcagactcggatgaaaag
agtgataacgaaggtagtagcaaggacaagaaaaagaactttagcctcttcgacttaacc
accctgattcacccacgatcagcagcgatcgcctccgaaagacacaccatcagcaacggc
tccgccctggtggtgcaggagccaccgagggagaagcagagaaaagtgaattttgtgacc
gatatcaaaaacttcgggttatttcatagacgatcaaaacaacacgctgccgagcaaaat
gcaaaccaaatcttctccgtttcagaagaggtggctcgtcaacaagctgaagcaccacta
gagacaaacatccaactggaatctcgagggttagcttcccggggtgacttgaacatccca
ggtctcagcgaacagtgtatattagtagatcatcgagaaagaaatacggattccctgggt
ttacaggttggcaagagagtgtgttcattcaagtcggagaaggtggtggtggaggacacg
gttccaatcataccaaaggagaaacacgcaaaggaagaggactgcagtgtagactacgat
gcaaacctcacagacatggtcacccatgaagattacgtgaccacaagattgtga
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