Orcinus orca (killer whale): 101283236
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Entry
101283236 CDS
T05247
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oor03016
]
101283236 (CDKAL1)
Enzymes [BR:
oor01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
101283236 (CDKAL1)
Transfer RNA biogenesis [BR:
oor03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
101283236 (CDKAL1)
Prokaryotic type
Methylthiotransferases
101283236 (CDKAL1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Bcl-2
Motif
Other DBs
NCBI-GeneID:
101283236
NCBI-ProteinID:
XP_033290708
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Position
10:complement(89282941..89937733)
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AA seq
612 aa
AA seq
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MCHGELHLKSLQFPESGVLIFQEDLRLIANNQEKMPSASCDTFLDDIEDIVSQEDSKPQD
RHFARKHVVPKVRRRNTQKYLQDENSPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQL
AAYGYKITENASEADLWLLNSCTVKNPAEDHFRNSIKKAQEENKKVVLAGCVPQAQPRQD
YLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKKDNGKRLGGARLDLPKIRKNPLIEI
ISINTGCLNACTYCKTKHARGNLASYPVDELVDRAKQSFQEGVCEIWLTSEDTGAYGRDI
GTSLPALLWKLVEVIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASD
TVLMEMKREYCVADFKRVVDFLKDKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFP
SLFINQFYPRPGTPAAKMEQVPAQVKKQRTKDLSQVFHSYNPYDHKIGERQKVLVTEESF
DSKFYVAHNRFYEQVLVPKNPTFMGKMVEVNVYESGKHFMKGQPVSDAKVYAPSISKPLA
KGEISGLTEEFRNRLGNHLNSVSHTLDATQQDSASSRMALQLQRLHQDCTLRMSVVLALF
AFLFAFLIKVCN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatggcgagctccatctaaagtcgctgcagtttccggagagtggcgtactcatc
tttcaagaagatttgagactaattgcgaataatcaagagaagatgccttctgcatcctgt
gatacattcctggatgacatagaagatattgtgtcacaagaagattcaaagccccaagat
aggcattttgcgagaaagcacgttgttccaaaggtgcgaaggcgaaatacccaaaaatat
ttgcaagacgaaaacagtccaccaagtgatagcactattccaggcatacagaaaatttgg
atacggacttggggttgttctcataataattcagatggagaatatatggctggacaacta
gctgcttatggatataaaattacagaaaatgcatcagaggcagacttatggctcctgaat
agttgtactgtaaaaaatccggctgaagaccactttagaaactcaattaaaaaagctcaa
gaggagaacaagaaagtagtgcttgctggatgtgttcctcaagcgcagcctcgccaggac
taccttaaagggctgagcatcataggggttcaacagatagatcgtgtggtagaagttgtg
gaggaaacaattaaaggtcactctgtgagactgctgggtcagaaaaaggataatggaaaa
cggttggggggagcacgactggatttgccaaagattaggaagaatccactgatagaaatc
atttccatcaacactgggtgtctcaatgcttgtacctactgcaaaactaaacacgccaga
ggaaatttggccagttatccagttgatgagttagtagatagagccaaacagtcttttcaa
gagggtgtttgtgaaatatggttgaccagtgaagacacaggggcttatggcagagatatt
ggcaccagtctgcccgcactgctgtggaagctggttgaagtgattccggagggagcaatg
ctgaggcttggcatgacaaatccgccctatattttagagcatctggaggaaatggcaaaa
atccttaatcacccccgagtctatgcctttctgcacataccagtccagtctgcctctgac
actgtgctcatggaaatgaaaagagaatactgcgtggctgacttcaaaagagtagtggat
tttctgaaagacaaagttcctggaataactattgctacagacattatctgtggttttcct
ggagaaacagaccaagattttcaagaaacagtgaaacttgttgaagagtacaaatttcca
agtctctttattaaccagttttacccaagaccaggaactcccgctgcaaaaatggagcaa
gttccagcgcaagtgaaaaagcaaagaacaaaagatctctctcaagtatttcattcttac
aatccatatgatcacaagattggtgagagacaaaaagtgttagtcacagaagaatctttt
gattccaagttttatgttgcacacaatcgattctatgagcaggttttagtgccaaagaac
cccacattcatggggaaaatggtcgaagtgaacgtttatgaatcaggaaaacattttatg
aaagggcagccagtttcagatgccaaagtatacgcgccatccatcagcaaaccattagca
aaaggagaaatctcaggtttaacagaggaattcagaaataggcttgggaaccacctgaat
tcagtatcccacaccttggatgcaactcagcaagactcggcgagttccagaatggcgcta
caattgcaaaggctacaccaggactgtacactgaggatgtctgtggtcctggctctgttt
gcttttctttttgcttttttgatcaaggtctgtaattaa
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