Orcinus orca (killer whale): 101283270
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Entry
101283270 CDS
T05247
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-1
KO
K16493
protocadherin alpha
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oor03036
]
101283270
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oor04515
]
101283270
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
101283270
Cell adhesion molecules [BR:
oor04515
]
Cadherins
Protocadherins
101283270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
101283270
NCBI-ProteinID:
XP_049564649
LinkDB
All DBs
Position
3:complement(67917449..67965276)
Genome browser
AA seq
733 aa
AA seq
DB search
MLFSRRGGQGGRCLLLSILLFTAWGAGSGQINYSVPEEAKHGTFVGRTAQDLGLELAELV
PYLFWVASKSHEDFLEVNLQNGILFVNSWIDLEELXEQNTKYSIHLEVLVDRPLQVLHVE
VEVKDVNDNPQVFSXVREQRLFIPESRLLDSRFPIEGAADADIGTNAFLTYTLSSSDYFS
LDVQASDELSKSLSPELKSVDREDTPELRLLLTATDGGKPELEGIVQLPIMVLNVNDNAP
WFAQAVYKVHLLDTTNVPATGTLMTTLNASDADKSVNGEIVFLLAKFKIDSSSGEIRLIG
XLDYEETKSYEIQVKTVDKGGPPMSNHCKVLVKVLDVNDNAPELAVTSIFALREESPLST
VIAFISLSDRDSGVNGXVTCTLTPHVPFKLVSTFKNYYSLVLDNALDRENLANYEVVVTA
RDXGSPSLSVTASVSVEVADVNDNAPVFAQPEYTVLVKENNPPGCHIFTVSVRDADAQEN
ALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAGVPPLGS
NVTLQMFVLDENDNAPALLLPGLGGGAGALSQLVAGSVGAGHVVAKVRAVDADSGYNAWL
SYELQPAAGGARSPFRVGLYTGEIITTRALNEADVSRQRLLLLVKGHGEPALTATATVLL
SLEDSSQGPKASSRVSTGAAGAEAALVDMNVYLIIAICAVSSLLLLTLLLYAALRCSAPS
SEGACGPGKPTLV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgctgttttcaaggagaggtggccagggaggccggtgcctgctgctctcgattctgctc
ttcacagcctggggggctggcagtggccagatcaactactcggtccctgaagaggccaaa
catggcaccttcgtgggccgcaccgctcaggacctggggctggagctggccgagttggtg
ccatacctgttctgggtggcgtccaaaagccacgaggactttctggaggtaaatctgcag
aacggcattttgtttgtgaattcttggattgacctggaggagctatgagaacagaacacg
aaatatagtattcacctggaggtgctcgtggacaggccgctgcaggtgttgcatgtggaa
gtggaggtgaaggacgttaatgataatccacaggtctttagttaggtgagagaacaaagg
ctatttattcctgaatctaggctactggattcacgtttcccgatagagggcgctgctgat
gcagacattggtaccaacgcttttctaacatacactctcagctccagtgattatttctct
ttggatgtacaggcaagtgatgaactgagtaagtcactttcgcctgaattgaagtctgtg
gatagagaagatacaccagaacttcgtttattattgacagccactgatgggggcaaacca
gaactagaaggtatagttcagctgccgatcatggtgctcaacgttaatgataacgcccca
tggtttgcccaggccgtgtacaaagtacacttattagacacgactaatgttccagcaact
ggaacattaatgaccacattaaatgcctctgacgctgacaaaagtgtaaatggcgaaatt
gtctttcttttggcaaaattcaaaattgattccagctcaggggaaattaggctaattggt
tgactggattatgaagaaacgaaatcctacgaaattcaggtaaaaacagttgataaagga
ggtcctccaatgtcaaatcactgcaaggttttagtgaaagtgctggatgtaaatgataat
gctccggaactggcggtcacatccatctttgccttaagagaggagtctccactcagcacc
gtcatcgccttcatctccttgtctgaccgtgactctggtgtcaatggctaggtgacctgc
accctgacgcctcatgtccccttcaagctggtgtccaccttcaagaattactattcgctg
gtgctggacaacgccctggatcgcgagaacctggcgaactatgaggtggtggtgaccgcg
agggacnagggctcgccttccctgtcggtcacagccagcgtgtccgtggaagtggccgac
gtgaacgacaacgcgcccgtgttcgcgcagcctgagtacacggtgttggtgaaggagaac
aacccgcccggctgccacatcttcacggtgtcggtgcgggacgcggacgctcaggagaac
gcgctggtgtcctactcgctggtggagcggagggtgggcgagcgagcgctgtcgagctac
gtgtcggtgcacgcggagagcggcaaggtgtacgcgctgcagccgctggaccacgaggag
ctggagctgctgcagttccaggtgagcgcgcgcgacgcgggcgtaccgcctctgggcagc
aacgtgacgctgcagatgttcgtgctggacgagaacgacaacgcgcccgcgctgctgctg
cccgggctgggcggcggggcgggcgcgctgagtcagctggtggcggggtcagtgggcgcg
ggccacgtggtggcgaaggtgcgcgcggtggacgcggactcgggctacaacgcgtggctg
tcgtacgagctgcagccggcggcgggtggcgcgcgcagcccgttccgcgtggggctgtac
acgggcgagatcattacgacgcgcgccctgaacgaggcggacgtgtcgcgccagcgcctg
ctgttgctggtgaagggccacggcgagccggcgctgacggccacggccaccgtgctgctg
tcgctggaggacagcagccaggggcccaaggcctcgtcgcgggtgtccaccggcgccgct
ggcgcggaggccgctctagtggatatgaacgtgtacctgatcatcgccatctgtgcggtg
tccagcctgttgttgctcacgctgctgctgtacgcggcgctgcggtgctcggcgccgtcc
agcgagggcgcgtgcgggcccgggaagcccacgctagtgtaa
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