Orcinus orca (killer whale): 101283404
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Entry
101283404 CDS
T05247
Symbol
RAD54L2
Name
(RefSeq) helicase ARIP4 isoform X1
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oor03400
]
101283404 (RAD54L2)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
101283404 (RAD54L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
101283404
NCBI-ProteinID:
XP_033280384
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All DBs
Position
10:complement(36852948..36943846)
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AA seq
1484 aa
AA seq
DB search
MSDESASGSDPDLDPDVELEDAEEEEEEEEEVAVEEHGRGDEEDLLDALANLENHDSTFC
LYDFNYYPSLEDMCGTECAPLGEDGQRPPRCTSTTSSQSEPSEQLRHHQGKSLASEDPKK
KRAQKPSHMRRNIRKLLREDQLEPVTKAAQQEELERRKRLEQQRKDYAAPIPTVPLEFLP
EEIVLRASDGPQLPPRVLTQEVICLDSSSGSEDEKSSRDEVIELSSGEEDTLHIVDSSES
VSEEDEEEEKGGTHVNDVLNQRDALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIR
FLYDNLVESLERFKTSSGFGCILAHSMGLGKTLQVISFIDVLFRHTPAKTVLAIVPVNTL
QNWLAEFNMWLPAPEALPADNKPEEVQPRFFKVHILNDEHKTMAARAKVMADWVSEGGVL
LMGYEMYRLLTLKKSFATGRPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVV
ICDEGHRIKNCQASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEF
SNMFERPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVIL
VRLSKIQRDLYTQFMDRFRDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANE
QDLDVEELGSSATSARCPSQGTKGKSEDNASMGEATNSKFLQGVGFNPFQERGNNIVTYE
WAKDLLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREAP
CLPGAEGQGVQKWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGV
NLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQG
MSDRVVDDLNPMLNFTRKEVENLLHFVEKEPAPQASLNIKGIKEPVLQLACLKYPHLITK
EPFEHESLLLNRKDHKLTKAEKKAAKKSYEEDKRTSVPYTRPSYAQYYPASDQSLTSIPA
FSQRNWQPTLKSDEKPVASVRPVQSTPIPMMPRHVPLGGSVSSASSTNPAMNFPINYLQR
AGVLVQKVVTTTDIVIPGLNSSTDVQARINAGESIHIIRGTKGTYIRTSDGRIFAVRATG
KPKAPEDGQMAASGSQGPSLESTSNGRHSASSPKAPDPEGLARPVSPDSPEIISELQQYA
DVAAARESRQSSPSSNAALPGPPAQLVDSSAVPGTALGTEPRHGGHCLNSSLLVTGQPCG
DRHPVLDLRGHKRKLATPPAAQESARRRSRKGHLPAPVQPYEHGYPVSGGFAMPPVSLNH
NLTPPFTSQAGENSLFMGSTPSYYQLSNLLADARLVFPVTTDPLVPAGPVSSSSTATSVT
ASNPSFMLNPSVPGILPSYSLPFSQPLLSEPRMFAPFPSPVLPSNLSRGMSVYPGYISPH
AGYPAGGLLRSQVPPFDSHEVAEVGFSSNDDEDKDDDVIEVTGK
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgaatccgcctcagggagcgatccagacctggacccagacgtggagctggag
gatgcggaagaggaggaggaggaggaggaggaggtggcagtggaggagcatggcaggggt
gacgaggaagacctgctggatgcccttgcgaaccttgagaaccacgattctacattctgt
ctctatgattttaactactacccatccctggaagacatgtgtggcactgagtgtgccccg
ctgggggaagatgggcagcggccaccgcggtgcacttcaactacctcatctcagtctgag
ccttcagagcagcttaggcaccaccaaggcaagagccttgcctccgaggaccccaaaaag
aagagagctcagaagccctcccacatgaggagaaacatacgcaagctgctccgggaggat
cagttggagccagttaccaaagcagcacaacaggaagaattggaaagaagaaaacgcctg
gaacagcagaggaaggattacgcagcccccattcccaccgttcccctggagttccttccc
gaggaaattgtcttaagagcaagtgatggaccccaactgcctcctcgggtcttgacccag
gaagtgatttgtttggacagtagcagtggcagtgaggatgaaaaaagcagtcgagatgag
gtgattgaattgagctctggagaggaggacactctgcacattgtggacagcagtgagtct
gtcagtgaggaggatgaggaagaggagaaaggaggcacccatgtgaatgacgtcttaaac
cagcgcgatgctctggggcgggtccttgtcaacttgaaccaccctccggaggaggagaat
gtcttcctggccccgcagttggcacgggcagtgaaaccgcatcagattggtgggatccgg
ttcctgtatgataacctggttgagtccttggagcgatttaagaccagtagtggctttggc
tgtatcctggcccacagcatgggactggggaaaactttgcaagtgatctccttcatcgat
gtcctcttccgccacacgccagccaaaaccgtccttgccattgtgccggttaatactctt
cagaactggctggcagagttcaacatgtggctcccagctcctgaagcccttccagctgac
aacaagcctgaagaagtccagcctcggttctttaaagttcacatcttgaatgatgagcac
aagacaatggcagctcgtgctaaagtgatggctgattgggtgtcagagggtggggtgctg
ctgatggggtacgaaatgtacagactcctcaccctgaagaaatcctttgccacaggtaga
ccgaagaaaaccaagaaacgttctcacccggtcatcattgatctggatgaggaagatcga
cagcaggagtttcgaagagagtttgagaaggccttatgccgccctggccctgatgtggta
atctgtgacgagggacaccgcatcaaaaactgccaggccagcacctcacaggccctgaag
aacattcgctctcgccgccgggtggtgctgactggataccccctgcagaacaacctcatc
gagtactggtgcatggtggactttgtgcgcccagacttccttggcacccggcaggagttc
agcaacatgtttgagcgccccatcctgaatggacagtgtattgacagcacgcctcaggat
gtccgcctcatgcggtaccggagccatgtcctgcacagcctcctggagggctttgtgcag
aggagaggccacactgtgctgaagattcatctccctgccaaggaagaaaatgtgatcctg
gtgcgactctctaagatccagcgagatttgtatacacagttcatggaccgcttccgggac
tgtggtagcagcggctggctggggctgaaccctctcaaggctttctgtgtctgctgcaag
atctggaatcaccccgacgtgctgtacgaagcccttcagaaggagaacctggccaatgag
caagacttagacgtggaagagcttggttcatcagcgactagtgcccgctgcccttcacag
ggaacaaaaggcaagagtgaggacaacgcctcaatgggagaggcgaccaatagcaagttc
ctacaaggggtcggctttaaccctttccaggagcgaggcaacaacattgtcacatatgaa
tgggccaaggaccttttgactaattaccagactggtgtcttagagaactctcccaagatg
gtactgcttttccacctgattgaggaaagtgtgaagcttggagacaagatccttgtgttc
agccagagcctttccaccttggctttaatcgaggagttcctaggcaaacgagaagcgccc
tgtctacctggtgctgaggggcaaggagtacagaagtgggttcgaaacgtcagctacttc
cggctagatggtagcacccctgcctttgagagggagcggctcattaatcagttcaatgat
cccagcaacctcaccacctggctgttccttctctccacaagggctgggtgcttgggcgtg
aatctgattggtgccaaccgagtggtggtgtttgatgcttcctggaacccttgccatgat
gctcaggcagtatgtcgggtataccgttacggccagaaaaagccctgtcacatctatcgc
cttgtggctgatttcaccctcgaaaagaagatctatgaccgtcagatttccaagcagggc
atgtcagatagggtcgtggatgatctcaatccaatgctgaactttactcgaaaggaggtg
gagaacctactgcactttgttgagaaggagccagctccccaagcatccttgaacataaag
gggatcaaggagccagtcctgcaacttgcctgtctgaaataccctcacctcatcaccaag
gagccttttgagcatgagtcattgctccttaaccgaaaggatcacaagctgaccaaagct
gagaaaaaagcagcaaagaaaagctacgaggaagacaaacgtacatcggtcccctacacc
cgcccatcatatgctcagtattaccccgccagtgaccagagcctgaccagcatccctgcc
ttcagtcagagaaactggcagccaacactgaagagtgatgagaagcctgtggccagtgtt
cgtcctgtacagtccaccccaatccccatgatgccacggcatgtcccactgggaggtagt
gtaagctctgcctccagcacaaatccagctatgaacttcccaatcaactacctgcaacgt
gcgggagtccttgtgcagaaggtggtcaccacaacagatattgttattcctggactcaac
agctccacagacgtacaggcaagaattaatgctggtgagagcatccacatcatccgtggg
acaaaagggacatacatccgtaccagtgatgggcgaatctttgctgtccgggcgactggc
aaaccaaaggcccctgaagatggtcagatggctgcctcaggttcccaggggccttctctc
gagtctacaagcaacggcagacacagtgcctcatcacccaaagcccccgaccctgagggg
ctggccaggcctgtctctccagacagcccggagatcatcagtgagctccagcagtatgca
gatgtggctgctgcccgggaatcccgtcagagctccccaagctccaatgctgccctgcct
ggccccccagctcaacttgtggacagcagtgctgttcctgggacagctcttgggactgaa
cctagacatgggggtcattgcctcaatagttccctcttggtgaccggccagccctgtggt
gacaggcacccagtgttggacttaaggggccacaagcgaaagttggccacaccacctgct
gcccaggagtcagcccgccggcggtccaggaagggccatctgccagcccccgtgcagccg
tatgaacacgggtatccagtttctggcgggtttgccatgccacccgtctccttaaaccat
aacctcaccccacccttcacctcccaggctggggagaattccctgtttatgggcagtacc
ccctcctactaccagctgtccaatttgctggcagatgcccgcctggtgtttccagtgact
actgaccctctggtgccagcaggccccgtcagttcctcttccacggctacctcagtcact
gccagcaacccctccttcatgctcaacccctctgtaccagggatactacccagctactca
ctcccattctcacagccactcctgtccgagccgaggatgtttgcgccttttccttcccct
gtcttgcccagcaacctttcacggggcatgtctgtctacccaggctacatatccccacat
gcaggctacccagctggcggccttctccggtcccaggtgcctccatttgactctcatgag
gttgctgaggtggggttcagctccaatgatgatgaggataaggacgatgatgtaatagag
gtcactgggaaatag
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