Orcinus orca (killer whale): 101283744
Help
Entry
101283744 CDS
T05247
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101283744 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oor03041
]
101283744 (USP39)
Spliceosome [BR:
oor03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
101283744 (USP39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101283744
NCBI-ProteinID:
XP_004271649
LinkDB
All DBs
Position
13:complement(14291776..14321976)
Genome browser
AA seq
565 aa
AA seq
DB search
MSGRSKRESRGSTRGKRESESRSSSARVRRERDRERETEAPSSRGSPVRVKREVEPASAR
EALAPVIPAVRVKREREADEDSEPEREVRAKNGRMDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDNDETNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccggtccaagcgggagtcccgtggatccacccgcgggaagcgcgagtccgag
tcgcggagcagctcggctcgtgtcagacgggagcgagatcgggagcgggagacagaggct
ccgagctcccggggcagtccggtgcgcgtgaagcgggaggtcgagccggcgagcgcgcgc
gaggccctggcgcccgtgatcccggcggtgcgggtgaagcgggagcgcgaggccgacgag
gactcggagcctgagcgggaggtgcgagcaaaaaatggccgcatggattctgaggatcgg
aggagccgccactgcccctacctggacaccattaacaggagtgtgctggactttgacttt
gagaaactgtgttccatctccctctcgcatatcaatgcgtatgcctgtctggtgtgtggc
aagtactttcagggccggggtttgaagtctcatgcctacattcacagtgtccagtttagt
caccatgtcttcctcaacctccacaccctcaagttttactgcctcccagacaactatgag
atcatcgattcctcgctggaggatatcacgtatgtgttgaagcccactttcacaaagcag
cagatcgctaacttggacaagcaagccaagttgtcccgggcatatgatggtaccacttac
ctgcccggtatcgtgggcctgaataacataaaggccaacgactacgccaatgccgtcctt
caggctctgtctaacgttcctcctctccgaaactacttcctggaagaagacaattataag
aacatcaagcgtcctcctggggatatcatgttcctgttggtccagcgttttggagagctg
atgagaaagctctggaaccctcgaaatttcaaggcacatgtgtctccccatgagatgctt
caagctgtcgtcctttgcagcaagaagacttttcagatcaccaagcaaggggatggagtc
gactttctctcctggtttttgaatgctctacactcagctctggggggcacaaagaagaaa
aaaaaaactattgtgactgatgttttccaggggtccatgaggatcttcactaaaaagctt
cctcatcctgatttgccagcagaagaaaaagagcagctgctccacaatgatgagtaccaa
gagacgatggtggagtccacgtttatgtacctgacgctggaccttcctactgcccccctc
tacaaggacgagaaggagcagctcattatcccccaggtgccgctcttcaacatcttggcc
aagttcaacggcatcactgagaaggaatataagacatacaaggagaactttctgaagcgc
ttccagcttaccaagctgcctccatatttaatcttttgtattaagagattcactaagaac
aatttctttgtggagaagaatccgactattgtcaacttccctattacaaatgtggatctg
agagagtacttgtctgaagaagtacaggcggtgcacaagaataccacctacgacctcatc
gccaacattgtacacgacggcaagccctctgagggctcctaccggattcatgtgcttcat
catgggacaggcaaatggtatgaattacaagacctccaggtgactgacatccttccccag
atgatcactctgtcggaggcttacattcagatttggaagaggcgagataacgatgaaacc
aaccagcagggggcttga
DBGET
integrated database retrieval system
