KEGG   Orcinus orca (killer whale): 101283923
Entry
101283923         CDS       T05247                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X2
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101283923 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oor03400]
    101283923 (APTX)
Enzymes [BR:oor01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     101283923 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     101283923 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     101283923 (APTX)
DNA repair and recombination proteins [BR:oor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101283923 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     101283923 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA FtsK_SpoIIIE_N Zf-C2H2_ZNF451_5th zf-C2H2_4 Glycoamylase
Other DBs
NCBI-GeneID: 101283923
NCBI-ProteinID: XP_004275122
LinkDB
Position
6:40913220..40942825
AA seq 342 aa
MMRVCWLVRQDNRHQRIKLPHLEAVMVGRSPETKITDKKCSRQQVQLKAECNKGYVKVKQ
VGVNPTSIDSLIIGKDQEVKLQPGQVLHLVNELYPYIIEFEEETKNPGLETHRKRKRSGN
SDSVERDAAQEAEASTRLEPGNNSSQCSVPPKKEKDASTKKESLGHWSQGLKISMEDPKM
QVYKDEQVVVIKDKYPKARHHWLVLPWASISSLKAVTGEHLELLRHMHAVGEKVIADFAG
SSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYFLESQAVIEMVQEA
GRVTVQDGMCELLKLPLRCHECQQLLPSIPQLKAHLRKHWPK
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgatgcgggtgtgctggttggtgagacaggacaatcggcaccagcgaatcaaacttcca
catttggaagcagtcatggttgggcgcagccccgagaccaagatcactgacaagaaatgt
tctcgacagcaagtgcagttgaaagcggagtgtaacaaaggatatgtcaaggtaaagcag
gtaggggtcaatcccaccagcattgactcactcataattgggaaagaccaagaggtgaag
ctgcagcctggccaggtcctccacctggtgaatgaactttatccatatatcatagagttt
gaggaagagacaaagaaccctggcctggaaacacacaggaagagaaagaggtcaggcaac
agtgattctgtagaaagggatgctgcccaggaagctgaggccagtacaagactagaacct
gggaacaactctagccagtgctctgtgcccccaaagaaggagaaagatgcatccaccaaa
aaggaatcattgggccactggagtcaaggcttgaagatttcaatggaggaccccaaaatg
caggtttacaaagatgagcaggtggtggtgattaaggataaataccccaaggctcgtcac
cactggctggtcttaccatgggcctccatttccagtctgaaggctgtgaccggagaacac
cttgagctcctcagacacatgcacgctgtgggggaaaaagtgatcgcagactttgctggg
tctagcaaactccgcttccgattgggctaccatgccattcccagcatgagccatgtacac
cttcatgtgatcagccaggattttgattctccttgccttaaaaacaaaaaacactggaat
tctttcaataccgaatacttcctcgaatcacaagctgtgattgagatggtacaagaggct
ggcagagtgactgtccaagatgggatgtgtgagctcttgaagctgcccctccgttgtcat
gagtgccagcagctgctgccttccattcctcagctgaaagcgcatctcaggaagcactgg
ccaaagtga

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