Orcinus orca (killer whale): 101284338
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Entry
101284338 CDS
T05247
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04140
Autophagy - animal
oor04211
Longevity regulating pathway
oor05010
Alzheimer disease
oor05014
Amyotrophic lateral sclerosis
oor05016
Huntington disease
oor05017
Spinocerebellar ataxia
oor05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101284338 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
101284338 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101284338 (RB1CC1)
05014 Amyotrophic lateral sclerosis
101284338 (RB1CC1)
05016 Huntington disease
101284338 (RB1CC1)
05017 Spinocerebellar ataxia
101284338 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
101284338 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oor01009
]
101284338 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101284338 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
oor03029
]
101284338 (RB1CC1)
Protein phosphatases and associated proteins [BR:
oor01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101284338 (RB1CC1)
Membrane trafficking [BR:
oor04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101284338 (RB1CC1)
Mitochondrial biogenesis [BR:
oor03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101284338 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
101284338
NCBI-ProteinID:
XP_033293555
LinkDB
All DBs
Position
17:complement(2823188..2883768)
Genome browser
AA seq
1625 aa
AA seq
DB search
MVPGAAGPAAAAGGGGGASRNRIRVRYKLTESREIIMKLYVFLVNTGTTLTFDTELTVQT
VADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILSERL
PAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEH
LQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSVEDIKLKLTHLGTAVSVMAKIPL
LECLTRHNYRECLGRLDSLPECEGSEKADMKTSTELVLSPDMPATMNKPSLTSFHKSVQH
VAPDTTDAESGKEMREPCPSPVQQDEAAVDAKDGDLPFFNVSLLDWINVQDRPNDVESLV
RKCFDSMSRLDPRIIRPFIAECRQTIANLDNQNMKAIKGLEDRLYALDQMIASCGRLVNE
QKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELA
NNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAAVEVVR
RKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTQ
KPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFDPLHQHVLALHNLVKAAQSL
DEMSQTITDLLSEQKASASQTSPQAASSPRIESTTGITTTTSPRTPPPLTVQGPLCPAVC
PLEELSPDSIDAHTFDFETIPHPNIEQTLHQASLDLDSLAESPESDFMSAVNEFVIEENL
SSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTSARGQEQSGHHASLGVQLEKCRVTA
HDSHLSVQTIKEDLCHFRTFVQKEQCDFSNSLKCTAVEIRNIIEKVKCSLEITLNERHQK
ELQSLKSEYEGKLAALVKESEENENKITKLKGDLVCLEEVLQNKDNEFALVKHEKEAVIC
LQKEKDQKLLEMESIMHTQHCEMEELKQSRETVLADLKRLRVENDEKLQLLRAELQCLEQ
SHLKDLEDTLQVRHTQELKKVMTGHEVCLEKLEKESQQRIEQMQDSHATAIQEKEQQLQE
LKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLVEQETEHLRTEMG
KLKQKIQDDNENYQVGLAELRTLMTIEKDQCISELISRHEEESDMLRAEVNKVTSLHHQA
SEVEKGLKEGLAELQSKLDSELSALEKEKDEKITRQEEKYRAIIQNLEKDKEECVMWHEQ
DREQLIQRLNCEKEAAVETARKEMSLEREAVEKELLEKIKHLESQIAKSHTIESTKEDSS
SLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKEN
IISDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKRLEEEVSRLRGGGPVPFPGVAA
APELYGACAPEPPAEAPDALGEGRLDSALETSTMSVRENVHMLSEERQRIMLLERTLQLK
EEENKRLNQRLMSQSMSSVSPRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYF
LHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVS
WNKKV
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgggagccgcgggccctgctgctgccgccggcggaggaggaggcgcttcccgt
aatcgtatcagagtgaggtataagctcacagaatccagagaaatcatcatgaagttgtat
gtatttctggtgaacactggaaccaccctgacatttgacactgaacttacagtgcaaact
gtggctgacctgaaacatgccatccacagcaagtacaagattgctattcagcaccaggtg
ttggtggtcaacggaggagagtgcatggctgcagaccggagagtgtgcacctacagtgcc
gggacggacacaaatccaatttttctttttaacaaggaaatgatcttatcggaacgtcta
cctgctattcctaaaactaccttttcaacagaaaatgacatggagataaaagttgaagag
tcccttatgatgcctgcagtttttcacactgttgcttcaaggacacaacttgcagtggag
atgtatgaagttgccaagaaactttgctctttctgtgaaggtctggtccatgatgaacat
cttcagcaccaaggctgggcggcaatcatggccaatctggaggattgttcaaattcctac
caaaagctacttttcaaatttgaaagtatttattcgaattacctgcaatccgtagaggac
atcaagttaaaacttactcatttaggaactgcggtttcagtcatggccaagattccactg
ttggagtgcctaaccagacataattacagggaatgtttgggaagactggattccttgcct
gaatgtgaaggctcagaaaaggccgatatgaaaacctccactgaactggtgctctctccc
gatatgcctgcaacaatgaacaaaccctccttaacctcatttcacaagtccgtgcaacat
gtagccccagacaccacagatgctgaaagtggaaaagaaatgagggaaccttgtccaagt
cctgtccagcaggacgaagctgcagtagatgctaaagacggtgacctgcctttttttaat
gtttctttgttagactggatcaatgtgcaggataggcctaatgacgtggaatcgctggtc
aggaagtgctttgattccatgagcaggcttgatccacggatcattcggccctttatagca
gaatgccgtcagactattgccaatctggataatcagaacatgaaggccatcaaggggctg
gaggaccggctgtacgccctggaccagatgatcgccagctgcggccgactcgtcaacgag
cagaaagaactcgctcagggatttttagctaatcagatgagagctgaaaacttgaaagat
gcgtctgtgttacctgatttgtgcctgagtcatgcaaatcagttgatgattatgttgcaa
aatcatagaaaactgttggatattaaacagaagtgcaccactgccaaacaagaactagca
aataaccttcatgtcagactgaagtggtgttgctttgtgatgcttcatgctgatcaggat
ggagagaagttgcaggctttgctccgcctcgttatagagctcttagagagagtcaagatc
gttgaagctctgagtacagttcctcagatgtactgcttagctgctgttgaggttgtcagg
agaaaaatgttcataaaacactacagggagtgggctggtgctttagtcaaagacggaaag
cgattatatgaggctgaaaagtcaaaaagggaatcctttgggaagttatttaggaagtcc
tttttaagaaatcgtctatttaggggattggactcctggcccccatccttttgtacacag
aagcctcgaaagtttgactgtgaacttccagatatttcattaaaagatttacagtttctg
caatcattttgtccttccgaagttcagccgttcctcagggtgcccctactttgtgacttt
gaccctctgcaccagcatgtacttgcgctacataatttggtaaaagcagcacaaagtttg
gatgaaatgtcacagaccattacagacctactgagcgaacaaaaggcatccgcgagtcag
acgtccccacaggcggcttcctcaccccggatagaaagcacgacaggaatcacaactact
acctcacccagaacaccccctccactcactgtgcagggccccttgtgtcctgcagtctgt
cccttagaagaattgtctccggatagcattgatgcacatacatttgattttgaaactatc
ccccatccaaacatagaacagactcttcaccaggcttcgttagacttggattcattagca
gaaagtcctgaatcagatttcatgtctgcagtgaatgagtttgtaatagaggaaaacttg
tcatctcccaatcctatcagtgatccacagagtccagagatgatggtggaatccctttac
tcctcagtcatcaatgccatcgacagcaggcgaatgcaggacacgagtgcccgaggtcag
gagcaatcgggccaccacgcgtctctcggcgtccagctggagaagtgccgtgtcactgcc
cacgactcgcacctcagtgtacaaaccataaaggaggacctttgccacttccgaacgttt
gtgcagaaggaacagtgtgacttctcaaattctttaaagtgtacagcagtagaaataaga
aacattattgaaaaagtaaaatgctctttggaaataacactaaatgaaagacaccaaaaa
gaactacagtctttaaaaagtgaatatgagggcaaacttgctgcactagtaaaggagagt
gaagaaaatgaaaacaaaatcacaaagctgaaaggagacttggtgtgccttgaggaggtt
ttacaaaataaagataacgaatttgctttggttaaacatgagaaggaagctgtcatctgc
ctgcagaaggaaaaggatcagaagttgttagagatggaaagtataatgcatacgcaacac
tgcgagatggaagaactgaagcagtcacgggagaccgtgctagcagacttaaagaggctc
cgcgtggagaacgatgagaagctccagctgttgagggcagagctccagtgcctggagcag
agccacctgaaggacttggaggacactctgcaagtcaggcacactcaggagctcaagaag
gtcatgaccggccacgaggtctgtttggagaaattagaaaaggaaagtcaacagagaatc
gagcagatgcaagattctcatgccacagccatccaggaaaaagaacagcagctccaggaa
ttaaaactcaaggtgtctgatttgtcggacatgaggtgtaagttagaggttgaacttgcc
ctgaaggaagcagaaacggatgaaataaaaattttgctggaagaaagcagagcccagcag
aaggagaccttaaaatctctcgtcgaacaagagacagaacatttgagaacagagatgggt
aaactaaagcaaaagattcaagatgataatgaaaattaccaggtgggcttggccgaacta
cgaactttaatgacaattgaaaaagatcagtgcatttcagagttaattagtagacatgaa
gaagaatctgatatgcttagggccgaggtgaacaaagtgacatcattgcatcaccaagca
tctgaagtagaaaaaggcctgaaagaaggattggctgaactgcagagtaaactggactca
gaactgagtgctcttgagaaagaaaaagatgagaagatcacccggcaagaagagaagtac
agagctattatccagaaccttgaaaaagacaaagaggaatgtgtcatgtggcacgaacag
gaccgagaacagctgattcagaggcttaattgtgaaaaagaggcagctgttgagactgcc
cgtaaagaaatgagcttggaaagggaagctgttgagaaggagttgttagaaaaaattaaa
catcttgagagtcaaatagcaaaaagtcataccattgagtctaccaaagaagattcttca
agcctagtcgctgaacttcaagaaaagctccaggaagaaaaagctaagtttctagaacaa
cttgaagagcaggagaaaagaaaaaacgaagaaatgcagaatgtgcgaacatctttgatt
gctgaacaacagaccaattttaatactgttttaacaagagagaaaatgagaaaagagaac
ataatcagtgacctcagtgacaagctgaaaagcacgatgcagcagcaggagcgggacaaa
gatttgatcgagtccctgtccgaggaccgcgcgcgcttgctggaggagaagaagaggctg
gaggaggaggtcagccggctgcggggcggcggccctgtccccttcccgggggtggccgcc
gcccccgagctgtatggggcctgtgcgcccgagcccccggcggaggccccggatgccctc
ggcgaaggcaggctggactcagcgctggagaccagcacgatgtctgtccgagaaaacgtc
cacatgctctctgaagaaaggcagaggataatgctgttggaacgaacactacagttgaaa
gaagaagaaaacaagcggttgaatcagagactgatgtctcagagcatgtcgtccgtgtcc
ccaaggcattcggaaaagatagctattagagattttcaggtgggagatctggtcctcatc
atcctggacgagcgccatgacaattacgtgctcttcaccgtgagtcccaccttgtacttc
ctgcactcagagtcgctgcctgccctggacctcaaaccaggtgagggggcttcaggtgca
tctcgaagaccatgggtccttggaaaagtgatggagaaggagtactgtcaggccaaaaag
gcacaaaacagatttaaagttcctttggggacaaagttttacagagtgaaagctgtgtca
tggaataagaaagtataa
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