KEGG   Orcinus orca (killer whale): 101284604
Entry
101284604         CDS       T05247                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03030  DNA replication
oor03410  Base excision repair
oor03420  Nucleotide excision repair
oor03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101284604 (RFC4)
   03410 Base excision repair
    101284604 (RFC4)
   03420 Nucleotide excision repair
    101284604 (RFC4)
   03430 Mismatch repair
    101284604 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oor03032]
    101284604 (RFC4)
   03036 Chromosome and associated proteins [BR:oor03036]
    101284604 (RFC4)
   03400 DNA repair and recombination proteins [BR:oor03400]
    101284604 (RFC4)
DNA replication proteins [BR:oor03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101284604 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    101284604 (RFC4)
Chromosome and associated proteins [BR:oor03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101284604 (RFC4)
DNA repair and recombination proteins [BR:oor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101284604 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    101284604 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 Rad17 DUF815 AAA_16 AAA_22 AAA_30 AAA_11 AAA_24 Mg_chelatase AAA_28 RuvB_N SLFN-g3_helicase AAA_5 AAA_19 ResIII DNAX_ATPase_lid AAA_7
Other DBs
NCBI-GeneID: 101284604
NCBI-ProteinID: XP_004278521
LinkDB
Position
5:complement(68670575..68684033)
AA seq 364 aa
MQAFLKGTSISSKPPLTKDRGVAATARSSGENKKAKPVPWVEKYRPKYVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVTGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQEQRLLDIADKEHIKISNEGLAHLVKVSEGDLRK
AITFLQSATRLTGGKEVTEKVITDIAGVIPAETIDGVFAACQSGSFDKLEAVVKDLIDEG
HAATQLVNQLHDGVVENDNLSDKQKSVITEKLAEVDKCLADGADEHLQLIGLCATVMQQL
TQNC
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgcaggcatttctaaaaggcacatctatcagcagtaaaccaccattgactaaggatcga
ggagtagctgccactgccagaagtagtggagagaacaagaaagctaaacctgttccgtgg
gtggaaaaatatcgcccaaaatatgtggatgaagttgctttccaggaagaagtggttgca
gtgcttaaaaagtctttagaaggagctgatctccctaatctcttgttttacggcccacct
ggaactggaaaaacatccactattttggcagcagctagggaactctttgggcctgaactt
tttcgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaagtagttaga
gagaaagtgaagaattttgcccaattaactgtgacaggaagccgttcagatgggaagcca
tgtcctccttttaaaattgtgatcctggatgaagcagattctatgacctcagctgctcag
gcagctttaagacgtaccatggagaaagagtctaaaaccacccgattctgtctcatctgt
aactatgtcagtcgaataattgaacctctgacctctagatgttctaaattccgcttcaaa
cctctgtcagataaaattcaagagcagcgattactagacatcgctgataaagaacatatc
aaaattagcaatgagggactagctcatcttgttaaagtgtcagaaggagacttaaggaaa
gccattacatttcttcaaagtgctactcgattaacaggtggaaaggaggtcacagaaaag
gtgatcacagacattgctggggtaataccagctgaaacaattgatggagtatttgctgca
tgtcagagtggctcttttgacaaactagaagctgtggtaaaggacttaatagatgagggt
catgcagcaactcagcttgtaaatcaacttcatgatggggttgtagaaaatgataacctt
tctgataaacagaaatctgttattacagaaaaacttgctgaagttgataaatgtttagca
gatggtgctgatgaacatctacagctgatcggcctctgcgcaactgtcatgcagcagtta
actcagaattgttaa

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