Orcinus orca (killer whale): 101284688
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Entry
101284688 CDS
T05247
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oor04040
]
101284688 (SCN10A)
Ion channels [BR:
oor04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101284688 (SCN10A)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
CcmD_alt
IQ
Motif
Other DBs
NCBI-GeneID:
101284688
NCBI-ProteinID:
XP_049549583
LinkDB
All DBs
Position
10:complement(42704950..42794829)
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AA seq
1965 aa
AA seq
DB search
MEFPSGSLETTNFHRFTPESLVEIEKRIAAKQEAKKTKEKSKKQKDQEEKTRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITITILVNCVGMTQTELPERMEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYVGEAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVRKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNCTVVNETANYSSHEKREW
NFCHRDPDFYTNKPGTSDPLLCGNGSDSGHCPEGYFCLKTSDNPDFNYTSFDSFAWAFLS
LFRLMTQDSWERLYQQTLRASGKIYMFFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATT
DEIEAKEKKFQEALQMLRTEQEVLAALGVDTASLHSHNGSPLASKNASVRRHRMKPRVSE
GSTDDNKSPQTESYNEHRMSFLGLTSGRHQASHGSVFHFQAPGRDISFPDGVTDDGVFPG
DCQSHGGSLLLGRDASQQGPLPRSPLPQTPSPGLGRGEDGPPALPTGELAAGAIEVSASD
AGQKTYLTAEYLNEHFRTQRAMSVVSIMTSVLEELEESKQRCPPCLTSLARKYLIWDCCP
TWVKLKTLLFVIVTDPFAELTITLCIVVNTIFMAMEHYGMSPAFEAMLQIGNIVFTVFFT
AEMVFKIIAFDPYYYFQKKWNIFDCIIVTVSLIELGAVRKGSLTVLRTFRLLRVFKLAKS
WPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDNYRDNRRKISAPNEEWPR
WHMHDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALL
LNSFSTDNLTAPEDDREVNNLQVALARIQVLGRRIKKALCSFLNWPFLLPRPKAEPQLVV
KLPLSTSKAENHITADTAAGSPGGLLAPGGPRDDHSDFITNPNIWVSVPIAEGESDLDDL
EDDGEEDAQSTQQEVIPQGQQEQRQQVGRYEDHLPPRSSGSGMSSEDLAPYLGEKWKDEA
PAQGPTEGVDDTSSSEGSTVDCLDLGEILRKIPELADDLDEPDDCFTEGCIRHCPCCKVN
SSKFPWAMGWQVRKTCYVIVEHSWFESFIIFMILLSSGALAFEDFYLDQKPTVKALLEYT
DRVFTFIFVFEMLLKWVAYGFKSYFTNAWCWLDFLIVNISLTSLIAKVLQYSDMASIKAL
RTLRALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFQK
CINKTSEGFLLVPWTTVNNMSDCERQNHTGSFFWVNVKVNFDNVAMGYLALLQVATFKGW
MDIMYAAVDSREVNMQPKWEDNVYMYLYFIIFIIFGSFFTLNLFVGVIIDNFNQQKKKLG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIIIMVLICLN
MITMMVETDEQSEEKTKVLNKINQFFVAVFMGECVMKMFALRHYYFTNGWNVFDLIVVVL
SIGSLVFSAILTSLGNLFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFN
IGLLLFLVMFIYSIFGMANFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSP
ILNTGPPYCDPNLPNSNGTRGDCGNPIVGILFFTTYIIISFLIVVNMYIAVILENFNVAT
KESTEPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNGNILIQMD
LPLVPGDKIHCLDILFTFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWK
QEDISATVIQKAYRSYVLHRSMTIANPPPVPRAEEEAVPLPDEGFVAFVANENCVLPDKS
ETASATSFPPSYDSVTRGLSDQVNLSTSSSIQNEGEAATKEATGP
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctctgggtctctggaaactaccaacttccatcgattcaccccagagtct
ctggtggagattgaaaaacgaattgctgctaagcaggaggcaaagaaaaccaaagagaag
tccaagaaacagaaggaccaggaagagaagactcggccccagcttgacttgaaagcgtgt
aaccagctgcccaagttctatggcgagctcccagcagagctagtcggggagccactggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttataacc
atcactattttggtcaattgtgtgggtatgacccaaaccgaacttccagagagaatggaa
tatgtcttcactgtcatttatacctttgaagccttgataaagatactggcaagaggattt
tgtctaaatgagttcacttacctgcgagatccttggaactggctggattttagtgtcatc
accctggcgtatgttggtgaagccatagatctccgagggatctcaggcctgcggacgttc
agagtccttagagctttaaaaacagtgtctgtgatcccagggctgaaggtcatcgtggga
gccctgatccactcggtgaggaagctggctgacgtgaccatcctcaccatcttctgcctg
agtgtctttgccctggtgggcctgcagctcttcaagggcaacctcaagaacaaatgtgtc
aagaattgcacagttgtcaacgagacggccaattactcttctcatgaaaaacgggagtgg
aatttctgtcatagggacccagatttctacaccaacaaaccaggcacttctgatccctta
ctgtgtggcaatggatctgattcaggccactgccctgaaggttatttctgccttaaaaca
tctgacaacccagattttaactataccagctttgactcctttgcttgggctttcctctca
ctgttccgcctcatgacacaggattcctgggaacgcctctaccagcagaccctgagggct
tctgggaaaatctatatgttttttttcgtgcttgttatcttcctggggtctttctacctg
gtgaatttgattttggctgtggtcaccatggcatatgaggagcagaaccaggcaaccact
gatgaaattgaagccaaggagaagaagttccaggaggcccttcagatgctccggacggag
caggaggtgctggcagccctgggggttgacacagcctctctccactcccacaatggatcc
cctttggcctccaaaaatgccagtgtgagaaggcacagaatgaagccaagggtgtcagag
ggctccacagatgacaacaagtcaccccagactgagtcttacaacgagcacagaatgtct
ttcctaggcctcacctcggggagacaccaggctagccatggcagtgtgttccatttccag
gcccctggccgagacatctcattccctgatggggtcacagatgatggagtctttcctgga
gactgtcaaagccatgggggctctctgctgctgggtagggatgcaagccagcaaggcccc
ctccctaggagtccactgcctcaaactcccagccctggcttagggcgtggagaagatgga
cccccagcattgcccactggtgagcttgccgctggagccatcgaagtctcggcatctgat
gcaggacagaagacttacttgacagcagaatacttgaatgaacatttccgaacccaaagg
gcaatgagtgttgtcagtatcatgacctctgtcctcgaggaactcgaggagtctaaacag
aggtgcccaccctgcttgaccagcttggctcggaagtatctgatctgggattgctgcccc
acgtgggtgaagcttaagacccttctcttcgtgattgtgacggacccctttgcagagctc
acaatcaccctgtgcattgtggtgaacaccatcttcatggccatggagcactacggcatg
agtcccgctttcgaagccatgcttcagattggcaacattgtctttactgtgttttttact
gctgaaatggtcttcaaaatcatagcgttcgatccctactattacttccagaagaagtgg
aacatctttgattgcatcatcgtcacagtgagcctgatagagctgggtgcggtcaggaag
gggagcctgacagtgctgcggaccttccgcctgctgcgggtcttcaagctggccaagtca
tggccgaccttaaacacgctcatcaagatcatcggcaactcggtgggggctctggggaac
ctcaccatcatcctggccatcattgtcttcgtctttgctctggttggcaagcagctcctc
ggggacaactaccgtgacaaccggcgcaaaatctcagcacctaacgaagaatggccacgc
tggcacatgcacgacttcttccactccttcctcatcgtcttccggatcctctgtggagag
tggattgagaacatgtgggcctgcatggaagtcggccagaagtccatttgcctcatcctt
ttcttgacggttatggtgctgggcaacctggtggtgcttaacctgttcattgccctgctg
ctgaactccttcagcaccgacaacctcacagccccagaggacgacagggaggtgaacaac
ctgcaggtggccctagcgaggatccaggtgttaggccggcgcatcaagaaggccctttgc
agcttcctcaactggcccttcttgctcccccggcccaaggcagagccccagctggtggtg
aaactcccactctccacctccaaagctgagaaccacattactgctgacacggctgcgggg
agccctggagggctcctggctcccggaggccccagggatgaccacagtgacttcatcacc
aatcctaacatatgggtctctgtgcccattgccgagggcgagtctgacctcgatgacttg
gaggatgatggtgaggaggatgcgcagagcacccagcaggaagtgatcccccaagggcag
caggagcagcggcaacaagtcgggagatatgaggaccacctgccacccaggagctcaggt
tctggaatgtcctctgaggacctggctccatacctaggtgagaagtggaaagacgaggct
cctgctcagggccctacagagggagtggacgacacgagctcctcagaaggcagcactgtg
gactgcctggatcttggggagatcctgaggaagatccctgagctggcggatgacctcgat
gagccagatgactgcttcacagaaggctgcattcgccactgtccctgctgcaaagtgaac
agctccaagtttccatgggccatgggctggcaggtgcgcaagacctgctacgtcattgtg
gagcacagctggttcgagagctttatcatcttcatgatcctgctcagcagtggagcgctg
gcctttgaagatttttaccttgaccagaagcccacggtgaaggccttgctggagtacacc
gacagggtgttcacgtttatctttgtgtttgagatgctgctcaaatgggtggcctatggc
tttaaaagttacttcaccaatgcctggtgctggctggacttcctcatcgtgaacatctca
ctgacaagccttatagcgaaggtgctgcagtattctgatatggcatccatcaaagccctt
cggaccctccgtgccctgcggccactgcgggccctgtctcgatttgaaggcatgcgggtg
gtggtagatgccctggtgggcgccatcccctccatcatgaacgtcctcctcgtctgcctc
atcttctggctcatcttcagcatcatgggtgtgaacctcttcgcagggaagtttcagaaa
tgcatcaacaagaccagtgaaggctttcttcttgtgccttggactactgtgaataacatg
tctgactgtgaacgtcaaaaccacactggaagcttcttttgggtcaatgtgaaggtcaac
tttgataatgttgcaatgggctacctcgcacttctgcaggtggcaacctttaaaggctgg
atggacatcatgtacgcagctgtcgattcccgggaagtgaacatgcagcccaagtgggag
gacaacgtgtacatgtacttgtacttcatcatcttcatcatttttggcagcttcttcaca
ctcaatctcttcgttggggtcatcattgacaacttcaaccaacagaaaaaaaagttaggg
ggccaggacatctttatgacagaggagcagaagaagtactacaatgccatgaagaaattg
ggctccaagaagccccagaagcccatcccacggcccctgaacaagtaccagggctttgtc
tttgacatcgtgaccaggcagactttcgacatcatcatcatggtcctcatctgcctcaac
atgatcaccatgatggtggagactgatgagcagagtgaagaaaagacaaaagtcctaaac
aaaatcaaccagttctttgtggccgtcttcatgggcgagtgtgtcatgaagatgttcgcc
ttgaggcattactacttcaccaatggctggaatgtatttgacttaattgtcgtggtcctc
tccattggaagcctggtgttttctgcaattcttacatcacttggaaatttattctcccca
acgcttttccgagtcatccgcctggcccggatcggccgcatcctcaggctgatccgcggg
gccaagggcatccgcacgctgctcttcgcgctcatgatgtccctgcccgccctcttcaat
attgggctgctgctcttcctggtcatgttcatctactccatcttcggcatggccaacttc
gcctacgtcaagtgggaggctggcattgatgacatgttcaacttccagaccttcgccaac
agcatgctgtgcctcttccagatcaccacatcggcaggctgggatgggctcctcagcccc
atcctcaacacggggcctccctactgcgaccccaacctgcccaacagcaacggcactaga
ggggactgtgggaaccccatcgtgggcatcctcttcttcaccacctacatcatcatctcc
ttcctcatcgtggtcaacatgtacattgcggtgattctggaaaacttcaatgtggccacg
aaggagagtacggagcccctgagcgaggatgactttgacatgttctacgagacttgggaa
aagttcgacccagaggccacccagttcattaccttctctgccctctcagactttgcagac
acgctctctggccccctgcggatcccaaaacccaatgggaatatattaatccagatggac
ttgcccttggtccctggagataagatccactgtttggacatcctgtttaccttcaccaag
aatgttctgggagaatctggggagttggattctctgaaggcaaatatggaggagaaattt
atggcaactaatctttcaaaagcatcctatgaaccaatagcaaccaccctccggtggaag
caagaagacatttcagccactgtcatccaaaaggcctatcgcagctacgtgctgcaccgc
tccatgacgatcgccaatcccccgcctgtgcccagggctgaggaggaggctgtgccactc
ccagatgaaggctttgttgcattcgtggcaaatgaaaactgtgtgctcccagacaaatct
gaaactgcctctgccacatctttcccaccatcctacgacagtgtcactagaggccttagt
gatcaagtcaacttaagcacatctagctcgatacaaaacgaaggggaggctgccactaag
gaagccactgggccctag
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