Orcinus orca (killer whale): 101284721
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Entry
101284721 CDS
T05247
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X4
KO
K13174
THO complex subunit 5
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101284721 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101284721 (THOC5)
03041 Spliceosome [BR:
oor03041
]
101284721 (THOC5)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101284721 (THOC5)
Spliceosome [BR:
oor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101284721 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
101284721
NCBI-ProteinID:
XP_004283800
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All DBs
Position
15:67219533..67253440
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AA seq
683 aa
AA seq
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MSSESSKKRKPKVIRSDGAPAEGKRNRSDIEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDVAIEIEDRKIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKVEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLRCKDDSVL
HLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
QFDKVGILTLRDYVLDLGHPYLWVQKMGGLHFPKEQPQHTVITDHSLSASHMETTMKLLK
TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIPHEDYTELHFTKDIM
EAGLAGDTNLYYMALVERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKGEKTNNNDDNIRA
MESEVNVCYKELCGPWPGHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
LFRGPSRMKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaatcgagcaaaaaacgaaagcccaaagtgatccgaagtgatggagctcca
gctgaagggaagcgtaatcgttctgacattgaacaggaaggtaaatactacagcgaggag
gctgaggtggacctgcgggaccctggcagagactatgagctgtacaagtacacgtgccag
gagttgcagaggctcatggcggagatccaggacctgaagagcaggggaggcaaggatgtg
gcaattgagatcgaagatcggaagatccagagctgtgtgcatttcatgactctaaaaaag
cttaaccgattagcccacatcaggttgaagaaaggaagagatcagactcatgaggccaag
cagaaagtggacgcctatcacctgcagctccagaacctgttgtatgaggtgatgcacctg
cagaaggagatcaccaaatgtctggagtttaagtcaaagcacgaagaaatcgatctagtc
agcttagaggagttttataaggaggctcctccagatatcagcaaggtggaagtcaccatg
ggagaccctcaccagcaaacccttgcacgtctggactgggagctggagcagcggaaaagg
ctggcggagaagtaccgagagtgcctgtccaacaaggagaagatccttaaggagattgaa
gtaaagaaggagtacctgagtagcctccagcctcgtctcaacagcatcatgcaggcttcc
ctaccggtgcaggagtatctgtttatgcccttcgaccaagctcacaagcagtatgagaca
gcccgacacctaccacctcccctctatgtcctctttgtccaggccactgcgtatgggcaa
gcctgtgataagacgttgtctgtggcgattgaaggcagcgtggatgaggccaaggctctg
ttcaagcctcccgaggactcccaagatgacgagagtgactcggatgctgaagaggagcag
accacgaaacgccggcgacccacactgggagttcagctggacgacaagcgcaaggagatg
ctgaagaggcacccactgtccgtcatgctggacctgaggtgcaaagatgacagtgtactg
cacctgactttctactacctcatgaacctcaacatcatgacggtaaaagccaaagtgaca
actgccacagaactgatcacccccatcagtgcaggtgacttgctgtctcctgactcagta
ctgagctgtttgtatcctggggatcatggaaagaaaactccaaatccagccaatcagtat
cagtttgataaagttggcatcctgactttgagggactacgtacttgacttagggcatccc
tatttgtgggtgcagaagatgggtggcctccacttccccaaagagcagccccagcacact
gtgatcactgaccactctctgagcgccagccacatggagaccaccatgaaactgctgaag
accagggtgcagtcccgcttggccctccacaagcagtttgcctccctggaacacggcatt
gtgccagttaccagtgactgccagtacctcttccctgcaaaggttgtctctcgcctggtg
aagtgggtgacgattccccatgaggattatacggaactgcattttaccaaagacatcatg
gaggcgggactggctggggacaccaatctctactatatggcactcgtggaaaggggcaca
gctaagctccaggctgccgtggtgctgaaccccggctactcctccatcccacccattttc
cagctctgtctgaactggaaaggggagaaaaccaacaacaacgacgacaatattcgggcc
atggagagtgaagtcaatgtgtgctacaaggagctgtgtggcccctggcccggccaccag
ctcttgacgaaccagctgcagcgcctgtgcgtgctgctggatgtctacctggagacggag
agccacgacgacagcgtggaggggcccaaggaatttccccaggagaaaatgtgtctgcgg
cttttcaggggccccagcaggatgaagccatttaaatataaccatcctcaaggattcttc
agccatcgctga
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