Orcinus orca (killer whale): 101284749
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Entry
101284749 CDS
T05247
Symbol
BRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03440
Homologous recombination
oor03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101284749 (BRIP1)
03460 Fanconi anemia pathway
101284749 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oor03400
]
101284749 (BRIP1)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101284749 (BRIP1)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101284749 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
101284749 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
DUF6399
Motif
Other DBs
NCBI-GeneID:
101284749
NCBI-ProteinID:
XP_033287525
LinkDB
All DBs
Position
19:complement(49807632..50003919)
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AA seq
1204 aa
AA seq
DB search
MMSSVCSEYTIGGVKINFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCS
ALAWQQSLSGKPVNEGLSKKAEVPLSCCCTCHSKNFTNNDVNQGTSYHFNSPSIPTSERN
GTLSTCQDSPEKTTLAAKLSAKKQASMYRDENDDFQVEKKRIRPLETTQQIRKRHCFEKE
VHHLDAEVASGKTTKLNSPLGKINSFSPQNPPGNCSRCYCSTKQGDSQDSSNTTKKDHGA
KSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCM
ELLDGKNGKFCYFYHGVHKISDQHILQTLQGMCKAWDIEEFVSLGKKLKACPYYTARELM
QDADIIFCPYNYLLDAQIRESMDINLKEQVVILDEAHNIEDCARESASYSITEVQLRFAR
DELDSMVNNNIRKKDHEPLRAVCYSLINWLEANSEHLVERGYESSCKVWSGSDMLLNLHK
MGITTATFPILQGHFSAILQKEEKVSSVHGKEEAREVPIISASTQIMLKGLFMVLDYLFR
ENSRFADDYKVAIQQTYSWINQTDTSDKNGFLVLPKNKKRLRQKAAVHVLNFWCLNPAVA
FSDINGKVWTIVLTSGTLSPMKSFSSELGVTFSIQLEANHVINNSQVWVGTIGSGPKGRN
LCATFQHTETFEFQDEVGALVLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGVWHNLEL
VKTVIVEPQRGEKTDFDELLQMYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAV
ITIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDW
GALILVDDRFRSNPSRYISGLSKWVRQLIQHHSTFESALESLAEFSKRHRKVIDVYKEER
KSVQDNESPLTVACLKDNTSTYLLEAASHLSPEYPREDDPLLLEESAQAVGAEKIVISRS
TSPTFNKQTNRVSWSGSNFLEQYLTGKILTGTPKFRSSEDCASNSSTFKTEKGREAVLPL
TDKYESSSLTVNTSVGPCPQSETIVPSIKINATLLNSEDPDILLSLVSEEAELSTSNTEA
EDESIYFTPELYDPIDTNEEKNEVVGTDRDNRLANNSNCILAEDLFEIKTMKGMDSVREM
KAEDCTGTKLNRLTHIKESKVDDIGSNVKMTHINELELGKTHETDIKNFKQSPPKNKDVF
PGVR
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcagtatgttctgagtatacaattggtggggtgaagattaactttccttgt
aaagcttatccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaag
cagcattgtttgttggagagccccacagggagtgggaaaagcttagccttactttgctct
gctttagcatggcagcaatctcttagtgggaagccagtgaacgaaggcttaagtaaaaaa
gctgaagtaccattgtcgtgttgttgtacatgccattcaaagaattttacaaacaatgac
gtgaaccagggaacttcatatcatttcaacagtccaagtataccaacttctgaaagaaat
ggcactttgtcaacttgtcaagactctcctgaaaaaactacactggctgcaaagctatct
gctaagaaacaggcatccatgtacagagatgaaaatgatgattttcaagtagagaagaaa
agaattcgacccttagaaactacacagcagattagaaaacgtcattgttttgaaaaggag
gtgcaccatttggatgcagaagttgcttcaggaaagaccacaaaactcaactccccatta
ggaaagataaactccttttctccacaaaatccccctggtaactgttctaggtgctattgt
tctactaaacaaggagacagtcaagattcttcaaataccactaagaaggatcatggggcg
aagtccaagatacccaaaatatattttgggacacgcacacacaagcagattgctcagatt
actagagagctccggaggacagcatactcaggggtcccaatgactattctttccagcagg
gatcacacttgtgtccatcctgaagtagtaggtaacttcaacagaaatgaaaagtgcatg
gaattgctagatggaaaaaatggaaaattctgctatttttatcatggtgttcataaaatt
agtgatcaacacatattacagactctccaagggatgtgcaaggcctgggatatagaagaa
ttcgtcagcttggggaaaaaactaaaggcatgtccatattacacagcacgagaactaatg
caggatgctgacataatattttgtccctacaactatcttctagatgcacaaataagggaa
agtatggatatcaatctgaaagaacaggttgtcattttagatgaagctcataacattgag
gactgtgctcgggaatcagcaagttacagtataacggaagttcagcttcggtttgctcgg
gatgaactagatagtatggttaacaataatataaggaagaaagaccatgaacccctacga
gctgtgtgctatagcctcattaattggttagaagcaaactctgaacatcttgtggaaagg
ggttatgaatcatcctgtaaagtatggagtggaagtgacatgctcttaaatttacacaaa
atgggcataaccactgctacttttcctattttgcagggacatttttctgctatccttcaa
aaagaagaaaaagtctcatcagttcatggtaaagaggaggcaagagaagtacctattatt
agtgcttcaactcaaataatgctcaaaggactttttatggtgcttgactatctttttagg
gaaaatagcagatttgcagatgattataaagtcgctattcaacaaacttactcttggata
aatcagactgatacttcagataaaaatgggttcttggttctaccaaaaaataagaaacgt
ttacgacagaaagcagcagttcatgtgctgaatttttggtgcttaaatccagctgtggcc
ttttcagatattaatggcaaggtttggacgattgttttgacatctgggacattatcacca
atgaaatccttttcatcagaacttggtgttacatttagtatccaactggaggctaatcat
gtcattaataactcacaggtttgggttggcaccattgggtcaggccccaagggtcgcaat
ctctgtgctaccttccagcacacggaaacatttgagttccaggatgaagtgggagcactt
gtgttatctgtgtgccagactgtgagccaaggaattttgtgtttcctgccatcttacaag
ttactagaaaagttaaaagaacgttggctctccactggtgtatggcataatctggagttg
gtgaagacagtcattgtagaaccacagagaggagaaaaaactgattttgatgaattactg
cagatgtactatgatgcgatcaagtacaaaggagaaaaagatggcgccctcctggtggca
gtttgtcgtggtaaagtgagtgagggtctggatttctcagatgacaacgcccgtgctgtc
ataacaataggaattccttttccaaatgtgaaagatctacaggttgaactaaagcgacaa
tataatgaccagcattcaaaattaagaggtcttttaccaggtcgtcagtggtatgaaatt
caagcatacagggccttaaaccaggccctaggtaggtgtattcgacacaaaaatgattgg
ggagctcttattctagtggatgatcgcttcaggagtaacccaagtcgatacatatctgga
ctttctaagtgggttcggcagctgattcagcaccattcaacctttgagagtgcgctggag
tccttggctgaattttccaaaaggcaccgaaaggtcattgatgtatacaaagaagagaga
aaatctgtacaggacaatgagtctccgcttacagtggcttgtttgaaggataatacctca
acttatttattagaagcagcaagccatctatcaccagaatatcctagggaagatgatcca
ttattattggaagagtctgcccaggcagtaggagcagaaaaaattgtgatttccagatcc
acaagcccaaccttcaacaaacaaacaaacagagttagctggtctggcagtaattttctg
gaacagtatcttactggtaaaattctgactggaacacctaagtttaggtcatcagaggac
tgtgcctctaattcttccactttcaaaacagaaaagggacgtgaagcagttttgccactc
actgataaatatgagtcctcctctctgacagtaaacacatcagttggaccatgccctcaa
tcggaaaccattgttccatcaataaagattaatgctactctcctgaattcagaagatcca
gacattctgttatctctagtaagtgaagaagctgaactttctacttcaaatacagaagca
gaggatgaatctatctattttacacccgaactttatgatcccatagatacaaatgaagaa
aagaatgaagtagttggaactgatagagacaacagattggctaataattcaaattgcatt
ttagctgaagatctttttgaaattaaaactatgaaaggaatggattcagtcagagaaatg
aaagctgaggattgcacaggcacaaagttgaatagactcacacatattaaagaaagtaaa
gttgatgacattggtagtaatgtaaaaatgactcatataaatgaattggaactgggaaaa
actcatgaaacggatataaagaactttaaacagtctcctcccaaaaataaagatgtgttc
cctggtgttaggtag
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integrated database retrieval system
