Orcinus orca (killer whale): 101285011
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Entry
101285011 CDS
T05247
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oor03400
]
101285011 (SMC6)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
101285011 (SMC6)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
TPR_MLP1_2
DUF3993
AAA_29
AAA_21
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
101285011
NCBI-ProteinID:
XP_004274911
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Position
13:78673074..78749555
Genome browser
AA seq
1097 aa
AA seq
DB search
MAKRKEGNFFSPGNAKRPRQEELDDFDKDGDEDECTVSFTNGTSALTAAEVGIIESIQLR
NFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLKGFVKDGQ
NSADISITLRNRGDDAYRASVYGDSIIVQQHISMDGSRSYKLKSETGALVSTRKEELIGI
LDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKERTK
EQINQGEERLTELKRQCLEKEERFQSIAGLSTMKTNLEYLKHEMAWAVVNEIEKQLNAIR
DNIKIGEDRAARLERKTEEQQVRLNEAEKKYKDIQDKLEKISQETNARAPECMALKADLT
SKKRAYNEAEVLYNHSLNEYRALKKDDEQLCKRIEELRKSADQSLEPERLERQKKISWLK
ERVKVLQDQESSVNQEIEQFQQAVEKDKEEHTRIKREELDVKNTLNYNQRQLKELKDSKT
DQLKRFGPHVPALLEAIDDAYRRGHFTYKPVGPLGACIHLRDTELALAIESCLKGLLQAY
CCHNHADERVLQALMKRFYSPGTSRPQIIVSEFRDEVYDVRHRAAYHPEFPTVLTALEID
NAVVTNSLIDMRSIETVLLIKNNSVARAVMQSQKPPKNCREAFTADGDQVFAGRYYSSEY
TRPKFLSRDVDSEISDLENEVENKKAQISNLQQHLSALEKDIKHNEELLRRCQLHYKELK
MKIRRSISEIRELENIEEHQSVDIATLEDEAQENKIKMKMVEKNMEQQKENMEHFKSLKI
EAENKYDAIKQKINQLSELADPLKDELNLADSEVDNQKRGKRHYEDKQKEHLDTLNKKKR
ELDMKEKELEEKMSQARQICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMRQ
YQEARETYLDLDNKVRTLKRFIKLLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQRAY
CGKMNFDHKNETLTISVQPGEGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCL
DEFDVYMDMVNRRIAMDMILKMADSQRFRQFILLTPQSMSSLPASKLIRILRMSDPERGQ
TTLPFRPVSQGEEEDRG
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaaaggaaggaaatttcttctctcctggaaatgccaaaagaccaagacaa
gaagagctggatgattttgataaagatggtgacgaagatgaatgtacagtttctttcact
aatggtacctctgctttgacagcagcagaagttggaatcattgagagtattcagctcaga
aacttcatgtgtcattcgatgcttggaccctttaaatttggttctaatgtcaactttgtt
gttggcaataatggaagtgggaagagtgcagtactcacagctcttatagttggtcttggt
ggaaaagcagttgctactaaccgaggatcttctttgaaaggttttgtgaaagatggacag
aactcagcagatatctcaataacgttaaggaacagaggggatgatgcctatagagccagt
gtgtacggtgactctataattgtgcaacagcacatcagcatggatggaagtcgatcttat
aaactgaaaagtgaaacaggcgccttggtttccactaggaaagaagaactaattggaatt
cttgatcattttaacatacaggtagataatccagtttctgtcttaacgcaagagatgagc
aagcagttcttgcagtctaaaaatgagggagacaaatacaaattctttatgaaagcaacc
caactggaacaaatgaaggaggattattcatacatcatggaaaccaaagaaagaacaaag
gagcagataaatcaaggagaagagcgacttactgaactaaagcgccagtgtttggagaaa
gaagaacgttttcagagtattgctggcttaagtacaatgaagaccaatctggaatacttg
aaacatgaaatggcttgggcagtggtcaatgaaattgaaaaacaactgaatgctatcaga
gacaacatcaaaattggagaagatcgtgctgctagacttgagaggaaaacggaagaacag
caggtcagacttaatgaagcagaaaaaaagtacaaggatattcaagataaactagaaaag
attagtcaagagacaaatgcacgagcaccagaatgtatggcattgaaagcagatcttact
tctaagaaaagggcctataatgaagctgaggttttatacaaccattccctaaacgagtat
agagcattaaagaaagatgatgagcagctttgcaaaagaattgaagaactgagaaaaagt
gctgatcagtctttggaacctgaacggttggaaaggcaaaaaaaaatatcttggttaaaa
gaaagagtaaaggtcttacaggatcaagaaagttcagtcaatcaagagatcgaacaattt
cagcaagccgtagaaaaggacaaagaagaacataccagaattaagagagaagagttagat
gtgaagaatacactgaactataatcagaggcaactgaaagaattgaaagacagtaaaact
gatcaactgaaaagatttggccctcatgttccagctcttctggaagccatagatgatgct
tacagacgggggcattttacctataaacctgtaggccctttaggagcttgcattcatctt
cgggacactgagcttgctttggccattgaatcttgcttgaaaggacttctgcaagcctac
tgttgccataatcatgctgatgaaagagtgcttcaggcactgatgaaaaggttttactca
ccagggacctcacggccacagataatagtttctgagtttcgggatgaggtgtatgatgta
agacacagagctgcttatcatccagagttcccaacagttctgacagctttagaaatagat
aatgcagttgtcacaaatagcctaattgacatgagaagcatagagacagtgctgctgatc
aaaaataattctgtagctcgtgcagtaatgcagtcccaaaagccacccaagaattgtaga
gaagcttttactgctgatggtgatcaagtttttgcagggcgttattattcatctgaatat
acaagacctaagtttctcagcagagatgtggattctgaaataagtgacttggagaatgag
gttgaaaataagaaagcccagatatcaaatcttcagcaacatttgtctgcccttgaaaag
gatattaaacacaatgaagaacttcttagaaggtgccaactgcattataaagagttaaag
atgaaaataagaagaagtatttctgaaattcgggaacttgagaatatagaagaacaccag
tctgtagatattgcaaccttggaagatgaagctcaagaaaataaaatcaaaatgaaaatg
gttgagaaaaacatggaacaacaaaaagagaatatggaacattttaaaagtctgaaaata
gaagcggaaaataagtatgatgcaattaaacagaaaattaatcagctatcagagctagca
gatccacttaaggatgaattaaaccttgctgattccgaagtggataaccaaaaacgaggg
aaacggcattatgaagacaagcaaaaagaacacttggatactttaaataaaaagaaacga
gaattagatatgaaagaaaaagaactagaggagaaaatgtcacaagcaagacaaatctgc
ccagagcggatagaagtaaaaaaatctgcatcaattctagacaaagaaattaatagatta
agacaaaagatacaggcagaacatgctagtcatggagatcgagaggaaataatgaggcaa
tatcaagaagcaagagaaacctatcttgatctggataacaaagtaaggactttaaaaagg
tttattaaattactggaagaaataatgacccatagatataaaacgtatcaacaatttaga
aggtgtttgactttacgatgcaaattgtactttgacaacttactatctcagcgggcctat
tgtggaaaaatgaattttgaccacaagaatgaaactcttactatatctgttcagcctgga
gagggaaacaaagccgctttcaatgacatgagggccttatctggcggtgaacgttctttt
tccacagtttgcttcattctttctctgtggtccattgctgaatctcctttcagatgcctg
gatgagtttgatgtctacatggatatggttaaccggagaattgcgatggatatgatactc
aagatggcagattcccagcgcttcagacagttcatcctgcttacccctcaaagcatgagt
tcacttccagcaagtaaactgattagaattcttcgaatgtctgaccctgaaagaggacaa
actacgttgcctttccgacctgtgtctcaaggagaagaagaggaccggggttga
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