KEGG   Orcinus orca (killer whale): 101285050
Entry
101285050         CDS       T05247                                 
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X2
  KO
K05236  coatomer subunit alpha
Organism
oor  Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:oor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oor04131]
    101285050 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oor04147]
    101285050 (COPA)
Membrane trafficking [BR:oor04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    101285050 (COPA)
Exosome [BR:oor04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101285050 (COPA)
  Exosomal proteins of bladder cancer cells
   101285050 (COPA)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 101285050
NCBI-ProteinID: XP_004284479
LinkDB
Position
1:96401378..96451683
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKEAIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPELDIPPGVAG
GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
KFEEAVEKFRSILLSVPLLVVDNKQETAEAQQLITICREYIVGLSMEIERKKLPKESLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgctaaccaaattcgagaccaagagtgcgcgggtcaaaggactcagttttcaccccaaa
agaccctggatcctgaccagtttacacaatggggtcattcagttatgggactatcggatg
tgtaccctcattgacaagtttgatgaacatgatggtccagtacgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgactataagattaaggtttggaattac
aagcttcggcgctgtctcttcacattgcttgggcacttagactacatccgcactacgttt
tttcatcatgaatatccttggattctgagtgcttcagatgatcagaccatccgagtgtgg
aactggcaatctaggacctgtgtctgtgtgttaacggggcacaatcattatgtaatgtgt
gctcagttccacccctcagaagacctggttgtatcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacttgtctcctggtgcagtggagtcggat
gtgagaggaataactggggttgatctgtttggaactacggatgcagtggtgaagcatgta
ctggagggtcatgatcgtggagttaactgggctgccttccaccccactatgcccctcatt
gtatctggggcagatgaccgtcaagtgaagatctggcgcatgaacgaatcaaaggcatgg
gaagttgatacctgccggggccattacaacaatgtatcttgtgctgtcttccaccctcgc
caagagttgatcctcagcaattctgaagacaagagtatcagagtctgggacatgtctaag
cggactggggttcagaccttccgcagggaccatgatcgtttctgggtcctagctgcccac
cctaaccttaacctctttgcagcaggccatgatggtggcatgattgtatttaaactggaa
cgggaacggccagcctatgctgttcatggcaatatgcttcattatgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagctgtgatgcagttgcggagtggt
tccaagtttccagtgttcaacatgtcgtacaatccagcagaaaatgcagtcctactgtgt
acaagagccagtaatttagagaatagtacctatgacttgtacaccatccccaaggatgcc
gactcccagaatcctgatgctcctgaagggaaacggtcctcaggcctgacagctgtttgg
gttgctcgcaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaggtacaggtgcccaactgtgatgagattttttacgctggc
acaggcaacctcctgcttcgagacgcagaatccatcacgctctttgacgtacagcagaag
cggactctggcatctgtgaagatttccaaggtgaaatatgttatctggtcagcagacatg
tcccatgtagcactactggccaaacatgccattgtgatctgtaaccgcaaactggaggct
ctatgtaacattcatgagaacattcgtgtcaagagtggggcctgggatgagagtggggta
tttatctataccacaagcaaccacatcaaatatgctgtcaccactggggactatgggatc
atccgaactctggatttacctatctatgtcacacgggtgaagggcaacaatgtatattgc
ctagacagagagtgtcgtcctcgggtgctcaccattgatccaactgagttcaagttcaag
ctggccctgatcaacagaaaatatgatgaggtactacacatggtaaggaacgccaaactt
gtaggccagtctatcattgcgtatctccagaagaagggatatcctgaagtggcactgcac
ttcgtcaaagatgagaaaactcgctttagtcttgcactggagtgtggaaacattgagatt
gctctggaagcagccaaagcactggatgacaagaattgctgggaaaagctgggagaagtg
gccttactacaggggaaccaccagattgtggaaatgtgttatcagcgcaccaaaaacttt
gacaaactttccttcttgtaccttatcactggcaatctagagaaacttcgcaagatgatg
aaaattgctgagatccgaaaggacatgagtggccattatcagaatgccctctacctggga
gacgtgtcagagcgggtacggatcctgaagaactgtgggcaaaagtcgctggcctatctc
acagctgctacccatggtttagatgaagaagctgagagcctgaaggagacatttgaccca
gagaaggaggcaatcccagacattgaccctaatgccaagctgcttcagccacctgcacct
atcatgccattggataccaattggcccttattgactgtatctaaagggttctttgaaggc
tccattgccagcaaggggaagggaggagcactggctgctgacattgacattgacaccgtt
ggtactgagggctggggagaggatgcggagctgcagctggacgaagatgggtttgtggag
gctacagaaggtttgggggatgatgctcttggcaagggacaggaagaaggaggtggctgg
gacgtggaagaagatctggagcttcctcctgagctggatataccccctggtgtagctggt
ggggctgaggatgggttctttgtgccccccactaagggaaccagcccaactcagatctgg
tgcaataactctcagcttccagttgatcacatcctggcaggctcttttgaaacagccatg
cggctccttcatgaccaagtaggggtaacccagtttggcccctacaagcaactgttcctg
cagacctatgcccgaggccgtaccacctatcaggctctgccctgcctgccctccatgtat
ggctaccctaatcgcaattggaaggatgcagggctgaagaatggtgtaccagctgtgggc
ctgaagcttaatgacctcatccaacggttgcaactgtgctaccagctcaccacagtgggc
aagtttgaggaggctgtggaaaaattccgttccattttactcagtgtgccacttcttgtt
gtggacaataaacaggagactgcagaggctcagcagctcatcaccatttgccgtgagtac
attgtgggtttgtccatggagatagaaaggaagaagctgcccaaagagtctctagaacag
cagaagcgcatctgtgagatggcagcctatttcacccactcaaacctgcagccagtgcac
atgatcctggtgctgcgtacagccctcaacctcttcttcaagctcaagaactttaagact
gctgccacctttgctcggcgcctgttggaactcgggcccaagccagaggtggctcaacag
acccgcaaaatcctgtctgcctgtgagaagaaccccacagatgcctaccagctcaattat
gacatgcacaacccttttgacatctgtgctgcatcttatcggcccatctaccgtggaaag
ccagtggagaaatgtccactcagtggggcctgctattcgcctgagttcaagggtcagatc
tgcagggtcactacagtgacagagattggcaaagatgtgattggtttaaggatcagccct
ctgcagtttcgctaa

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