Orcinus orca (killer whale): 101285095
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Entry
101285095 CDS
T05247
Symbol
SIRPB1
Name
(RefSeq) signal-regulatory protein beta-1 isoform X1
KO
K06551
signal-regulatory protein alpha/beta1/gamma
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04148
Efferocytosis
oor04380
Osteoclast differentiation
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101285095 (SIRPB1)
09150 Organismal Systems
09158 Development and regeneration
04380 Osteoclast differentiation
101285095 (SIRPB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oor04515
]
101285095 (SIRPB1)
04090 CD molecules [BR:
oor04090
]
101285095 (SIRPB1)
Cell adhesion molecules [BR:
oor04515
]
Immunoglobulin superfamily
SIRP family
101285095 (SIRPB1)
CD molecules [BR:
oor04090
]
Proteins
101285095 (SIRPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
V-set
ig
C2-set_2
I-set
Ig_2
Motif
Other DBs
NCBI-GeneID:
101285095
NCBI-ProteinID:
XP_012389615
LinkDB
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Position
16:complement(29010328..29085436)
Genome browser
AA seq
394 aa
AA seq
DB search
MPIPVSLSNHPPPCLLLTLLLGLTGVAGEDELQVIQPDRSVSVAAGETATLRCDVTSLLP
VGPVKWFRGTGPGRELIYSVSGVPFPRVTTVADTTRRNNMDCSIRISNITPADTGMYYCV
KFKRGSPDVEFKSGPGTHLTVSAKPSPPVVSGPTVRVTPEQTVSFTCKSHGFTPRNISLK
WFKNGNELSASQTDVEPEGNKVSYSISSTTKVVLAPGDVRSQVICEVTHITLQGDPPLRG
TANLSETIRVPPTLTITQHPMAGNQVNITCQVNKFYPQRLQLTWLENGNVSRIDMASTLI
ENKDGTFNRTSSLLVNSSAHREAVLLTCQVEHDGQPAVTKNHIVESSAPQKNQDADERIG
PELSSPLLVVLLLGPKVLLVVGVSVIFVYRKHWA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccctgtctctttgtccaaccatcctcctccttgcctgctgctgactctactg
ctgggactcacaggagtggcaggtgaggacgagctgcaggtgattcagcctgacaggtca
gtttcagttgcagcaggagagacggccactctgcgctgcgacgtgacctccctgctcccc
gtggggcccgtcaagtggttcaggggcacagggccaggccgggagttaatctacagtgtc
agcggagttcctttccctcgagtaacaactgttgcagatactacaaggagaaacaacatg
gactgttccatccgcatcagtaacatcacgccagcagacaccggtatgtactactgtgtg
aagttcaagagaggaagccctgacgtggagtttaagtctggaccaggcactcatctcact
gtgagtgccaaaccctctcctcctgtggtatcaggccccacagtgagggtcacacctgag
cagacagtgagcttcacctgcaaatcccacgggttcacccccagaaacatctccctgaaa
tggttcaaaaatggcaatgagctctcagcctcccagaccgacgtggaaccagagggaaac
aaagtttcctacagcatctcgagcacaaccaaggtggtgctggccccgggggatgttcgc
tcccaggtcatctgcgaggtgacccacatcaccctgcagggagaccctcctcttcgtggg
acagccaacttatctgagaccatccgagttccgcctaccttgacgattacccaacacccc
atggcggggaaccaggtgaatatcacctgccaggtgaacaagttctacccccagcgccta
cagctgacctggttggagaacggaaatgtgtcccgaatagacatggcctcgaccctcata
gagaacaaggacgggacctttaaccggacgagctcgctcctggtgaactcatctgcccac
agggaggctgtgctgctcacctgccaggtggagcatgacggacagccggcggtcaccaaa
aaccacatcgtggagtcctctgctccccagaagaaccaggatgcagatgaacgtattggc
ccggagctgtcttctcctctcctggtagttctcctcctaggccccaaggtgctgttggtg
gtcggtgtctctgtcatctttgtctacaggaagcattgggcctga
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