Orcinus orca (killer whale): 101285323
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Entry
101285323 CDS
T05247
Symbol
HOXA1
Name
(RefSeq) homeobox protein Hox-A1 isoform X1
KO
K09301
homeobox protein HoxA/B/D1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101285323 (HOXA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101285323 (HOXA1)
Transcription factors [BR:
oor03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
101285323 (HOXA1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7255
PHC2_SAM_assoc
Motif
Other DBs
NCBI-GeneID:
101285323
NCBI-ProteinID:
XP_004265706
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Position
9:48757077..48759727
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AA seq
332 aa
AA seq
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MDNARMSSFLEYPILSGGDSGTCSARAYPSDHGITTFQSCAVSANSCGGDDRFLVGRGVQ
ISPPHHHHHHHPQPATYQTAGNLGVSYSHSSCGPSYGAQNFGAPYSPYALNQEAEVSGGY
PSCAPAVYSGNLSSPMVQHHHHHQGYAGGAVGSPQYIHHSYGQEHQSLALATYNNSLSPL
HASHQEACRSPASETSSPAQTFDWMKVKRNPPKTGKVGEYGYVGQPNAVRTNFTTKQLTE
LEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLLPISPATPTGS
EEKAEESSEKSSSSPCVPSPGSSTSDTLPTSH
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgcaagaatgagctccttcctggaataccccatcctcagcggtggcgactcg
gggacctgctcagcgcgagcctacccctccgaccatggaattacaactttccagtcgtgc
gcggtcagtgccaacagctgtggcggcgacgaccgcttcctagtgggcaggggggtgcag
atcagcccgccccaccaccaccaccatcaccacccccagccggccacctaccagactgct
gggaacctgggggtatcctactcccactcgagttgtggtccaagctacggcgcgcagaac
ttcggcgcgccttacagcccctacgcgttaaatcaggaagcagaagtaagtggtgggtac
ccctcgtgcgctcccgctgtttactctggaaatctctcatctcccatggtccagcatcac
caccaccaccagggttatgccgggggcgcggtgggctcgcctcagtacattcaccactca
tatggacaagagcaccagagcctggccctggccacgtataataactccttgtcccctctc
cacgccagccaccaagaagcctgtcgctcccctgcatcagagacatcttctccagcacag
acctttgactggatgaaagtcaaaagaaaccctcccaaaacagggaaagtcggagagtat
ggctacgtgggtcaacccaatgcagtgcgtaccaacttcactactaaacagctcacggag
ctggagaaggagtttcacttcaacaagtacttgacgcgtgcccgcagggtggagattgcc
gcatccctgcagctcaatgagacccaggtgaagatctggttccagaaccgccgaatgaag
cagaagaaacgagagaaggagggcctcttgcccatctctccagccactccgacgggaagc
gaggagaaggccgaggaatcctcagagaagtccagctcctcaccctgcgttccttccccg
gggtcttctacctcagacactctacctacctcccactga
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