Orcinus orca (killer whale): 101285367 Help Entry 101285367         CDS       T05247                                  Symbol XAB2 Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism oor  Orcinus orca (killer whale) Pathway oor03040   Spliceosome Brite KEGG Orthology (KO) [BR:oor00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     101285367 (XAB2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:oor03019]     101285367 (XAB2)    03041 Spliceosome [BR:oor03041]     101285367 (XAB2) Messenger RNA biogenesis [BR:oor03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      101285367 (XAB2) Spliceosome [BR:oor03041]  Complex B   Other components    Prp19-related factors     101285367 (XAB2)  Complex C     101285367 (XAB2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 TPR_12 TPR_2 TPR_8 Suf TPR_19 TPR_15 ARM_TT21 ARM_TT21_C TPR_NPHP3 TPR_1 DHR-2_Lobe_A Motif Other DBs NCBI-GeneID:  101285367 NCBI-ProteinID:  XP_004277342 LinkDB All DBs Position 3:complement(5672196..5681728) Genome browser AA seq 853 aa AA seqDB search MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLSV DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW HKRVALHEGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA YERGISLFKWPNVSDIWSTYLTKFIARYGGQKLERARDLFEQALDGCPPKYAKTLYLLYA QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRSIYQKAIEVLS DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI REMLRIRRSVQATYNTQVNFMASQMLKVTGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA AEAEQDQPSRAQSKILFVRSDASREELAQLAQQANPEEIELGEDEDEMDLEPNEVRLEQQ SVPAAVFGSLKED NT seq 2562 nt NT seq  +upstreamnt  +downstreamnt atggtggtgatggcgcgcctctcgaggcccgagcggccggaccttgtcttcgaggaggag gacctcccctatgaggaggaaatcatgcggaaccagttctccgtcaaatgctggctccgc tacattgagtttaagcagggtgccccgaagcccagactcaatcagctctatgagcgggcg ctgaagctgctgccctgcagctacaaactctggtaccgctacctgaaggcgcgccgggca caggtgaagcatcgctgtgtgaccgaccctgcctacgaagatgtcaacaactgccacgag agggcctttgtgttcatgcacaagatgccccggctgtggctagattactgccagttcctg atggaccagggacgcgtcacacacacgcgccgcactttcgaccgtgccctccgagcgttg cccatcacacagcactctcgtatttggcccttgtacctgcgcttcctgcgctcacacccc ctgcctgagaccgctgtgcggggttaccggcgcttcctcaagctgagccccgagagtgcc gaggagtacatcgagtacctcaagtcgagcgaccggctggacgaggccgcacagcgcctg gccaccgtggtgaacgacgagcgcttcgtgtccaaggccggcaagtccaactaccagctg tggcacgagctctgcgacctcatctcccagaacccagacaaggtgcagtctctcagtgtg gacgccatcatccgcgggggcctcacccgcttcaccgaccaactgggcaagctctggtgc tcgctggctgactactacatccgcagcggtcacttcgagaaggctcgggacgtgtatgag gaggccatccggaccgtgatgaccgtgcgggactttacccaagtgttcgacagctatgcc cagttcgaggagagcatgatcgcggcgaagatggagacagcctcggagctggggcgggag gaggaggacgacgtggacctggagctgcgcctggctcgctttgagcagctcatcagccgg cggcccctgctcctcaacagcgtcctgctgcgccagaacccgcaccacgtgcacgagtgg cacaagcgcgtggccctgcacgagggccgcccgagggagatcattaacacgtacacggag gccgtgcagactgtggaccccttcaaggccaccggcaagccccacaccctgtgggttgcg ttcgccaagttttacgaggacaacgggcagctggatgacgcccgcatcatcctggagaaa gccaccaaggtgagcttcaagcaggtggacgacctggccagcgtgtggtgcgagtgtggc gagctggagctccggcacgagaactacgaccaggccttgcggctgctgcgaaaggcgacg gcgctgcccgcccgccgcgccgagtactttgacggctcggagcccgtgcagaaccgcgta tacaagtctctgaaggtgtggtcaatgctggccgacctggaggagagcctcggcaccttc cagtccaccaaagccgtctatgaccgcatcctggacctgcgcatcgccacgccccaaatc gtcatcaactacgccatgttcctggaggagcacaagtactttgaagaaagcttcaaggca tacgagcgtggcatctcgctgttcaagtggcccaacgtgtccgacatctggagtacctac ctgaccaagttcatcgcccgctacgggggccagaagctggagcgggcacgggacctgttt gagcaggcgctggatggctgccctcccaaatacgcaaagaccctgtacctgctgtacgca cagctggaggaggagtggggcttggcccggcacgccatggccgtgtatgagcgcgccacc agggccgtggagcccgcccagcaatacgacatgttcaacatctacatcaagcgggcggcc gagatctacggggtcacccacacccgcagcatctatcagaaggccatcgaggtgctgtca gacgagcacgcccgggagatgtgcctgcggttcgcggacatggagtgcaagctcggggag atcgaccgcgcccgggccatctacagcttctgctcgcagatctgtgacccccggacgacc ggggccttctggcagacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc cgggagatgctgcggatccgccgcagcgtgcaggccacgtacaacactcaggtcaacttc atggcctcccagatgctcaaggtgacgggcagcgccacgggcactgtgtccgacctggcc cccgggcagagcggcatggacgacatgaagctgctggaacagcgggccgagcagctggcg gctgaggccgagcaggaccagccctcgcgggcccagagcaagatcctgtttgtgaggagt gatgcctcccgggaggagctggcccagctggcccagcaggccaacccggaggagatcgag ctgggcgaggatgaggacgagatggacctggagcccaacgaggtgcgcctggagcagcag agcgtgccggccgccgtgttcgggagcctgaaggaagactga

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