Orcinus orca (killer whale): 101285438
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Entry
101285438 CDS
T05247
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46 isoform X3
KO
K12590
exosome complex component RRP46
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101285438 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101285438 (EXOSC5)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101285438 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101285438
NCBI-ProteinID:
XP_004271294
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All DBs
Position
20:complement(47394590..47402630)
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AA seq
235 aa
AA seq
DB search
MEGVMQTETKIRAESGIESGPRGPGCSLRNFACEQNLLSRPDGSASFLQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVTLRPKIGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVL
QVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGTLLLDPTAKQEKEARAV
LTFALDSVERKLLMSTTKGLYSDAELQQCLAAAQAASQHVFRFYRESLQRRYSKS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggagggagtgatgcagactgagactaagatccgcgctgagtctggaatagagtccggc
cctcggggtcccggttgtagcctccggaactttgcctgcgaacagaatttgttgtcccgg
cccgatggctcggcctctttcctgcaaggcgatacctccgtcctggcaggcgtgtacggg
ccagcagaggtgaaagtcagcaaagagatcttcaacaaggccacactggaggtgaccctg
aggccgaagatcggtctgcctggcgtagcggagaagagccgggagcggctgatcagaaac
acgtgtgaagcagtggtgctgggagccctgcacccccgcacctccataaccgtggtgctg
caggtcgtcagcgatgctggctctctcctggcctgttgcctgaatgccgcctgcatggca
ctggtggacgcaggtgtgcccatgcgggccctcttctgtggggtcacctgtgcgctggac
tctgatgggaccctcctgctggaccccacagccaagcaagaaaaggaggcccgggcagtc
ctgacctttgcacttgacagcgtggaacggaagctgctgatgtccaccactaaggggctc
tactctgatgctgagctccagcagtgcctggctgcagcccaggctgcctcccagcacgtc
ttccgcttctaccgggaatctctgcagaggcgttactccaagagctga
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