Orcinus orca (killer whale): 101285536
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Entry
101285536 CDS
T05247
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oor03041
]
101285536 (DDX18)
03009 Ribosome biogenesis [BR:
oor03009
]
101285536 (DDX18)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101285536 (DDX18)
Spliceosome [BR:
oor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101285536 (DDX18)
Ribosome biogenesis [BR:
oor03009
]
Eukaryotic type
90S particles
Helicases
101285536 (DDX18)
Pre-60S particles
101285536 (DDX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
101285536
NCBI-ProteinID:
XP_012390919
LinkDB
All DBs
Position
7:complement(18798910..18815412)
Genome browser
AA seq
721 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLQGASAVNLSETQNGDVSERTVGGGKIKKSLKQS
VNVGLSETQNGDISEEAVVGGKVKKFLKQSMNAGWSEAQNGDLPKETVENVKVKKSSKKN
GDLPKETVENVKVKKSSKTSTTLTSGEAAIQSPNSESKKKKKKKKKRKIVDDAGPDSKKA
KTEDKGDSEDGAQAPEETENSVEKPDNEDDDSMVPSLPLGLTGAFEDTSFDSLTNLVNEN
TLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPR
NGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGINVIVATP
GRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTR
KVEDLARISLKKEPLYVGVDDDKAHATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLM
VFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADSGILLCTDVAARGL
DIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLS
EFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQV
ALSFGFKVPPFVDLNVNSNDGKLKKRGGGGGFGYQKARKVEKSKIFKHISKKPSDGRQFS
H
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatttaccgatgaaacttttacgcaagaagatcgagaagcggaacctcaaattg
cgacagcgaaacctaaagctccagggggcctcagctgtgaacttgtcagaaactcaaaat
ggggatgtgtcagaaagaacagtgggaggtggaaaaattaaaaagtccctaaaacagtct
gtgaatgtgggcttgtcagaaacccaaaatggagacatctctgaagaagcagtagtaggt
ggaaaagttaaaaaattcctaaaacagtctatgaatgcaggctggtcagaagcccaaaat
ggagacttacctaaagaaacagtggaaaatgtaaaagttaaaaaatcctccaagaaaaat
ggagacttacctaaagaaacagtggaaaatgtaaaagttaaaaaatcctccaagacatct
accacgctgaccagtggggaagcagcaatacagtctcccaattcagaatcaaaaaagaag
aagaagaagaagaaaaagagaaaaatagtggatgatgctgggcctgattccaaaaaagca
aaaactgaagacaaaggagactctgaagatggtgcccaggctcctgaagaaacggagaac
agtgtggagaagccagacaatgaggacgatgacagcatggtacccagcctgcccctggga
ctgacaggagcttttgaggatacttcgtttgattctctgactaatcttgtcaatgagaac
actctgaaggcaataaaagaaatgggctttacaaacatgactgaaattcagcataaaagt
atcagaccacttctggaaggcagggatcttctggcagctgcaaaaacaggcagtggcaaa
accctggcatttctcattcctgcagttgaactcattgttaagttaaggttcatgcccagg
aatggaacaggagtccttattctctcacctactagggaactggccatgcagacttttggt
gtccttaaggaactgatgacacaccatgttcacacgtatgggttaataatgggtggcagt
aacagatctgctgaagcacagaagcttgccaatgggatcaacgtcattgtggccacacca
ggccgtctcctggaccatatgcagaatacaccagggtttatgtataaaaacctacagtgt
ctggttattgatgaggctgatcgtatcttggatgttgggtttgaagaagaattaaagcaa
attattaaacttctgccaacccgcagacagaccatgctcttttctgccacacaaacccgg
aaagttgaagacctggcaaggatttctctgaaaaaggagcccttgtatgttggtgttgac
gacgataaagctcatgcaaccgtggatggtcttgagcagggatatgttgtctgtccttcc
gaaaagagattcctcctactctttacattccttaagaagaaccggaagaagaaactaatg
gtcttcttttcatcctgtaagtccgtgaaataccactatgagttgctgaactacatcgat
ttgcctgtcttggccattcatggaaggcagaaacaaaataagcgtacgaccacgttcttc
cagttctgcaatgcagattcggggatcttgttgtgtacagacgtggcagctagagggctg
gatattcctgaagtggactggattgttcagtatgaccctccggatgaccccaaggaatac
attcatcgtgtgggcagaacagccagaggcctgaacggcagagggcacgccttgctcatt
ttgcgccctgaagaattgggtttccttcgctacttgaagcaatccaaggttccattaagt
gaatttgagttttcctggtccaaaatttctgacattcagtctcagcttgaaaaactgatt
gaaaagaactacttccttcataagtcagcccaggaagcgtataagtcatacattcgagcg
tatgattcccattcgctgaaacagatctttaatgttaataacttaaacttgcctcaggtt
gctctgtcatttggtttcaaggtgcctccttttgttgatttgaacgtgaacagcaatgac
ggcaaacttaaaaaaaggggtggcggcggtggcttcggctaccagaaagccagaaaagtc
gagaagtccaagatcttcaagcacataagcaagaaaccatctgacggcaggcagttctct
cactga
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