Orcinus orca (killer whale): 101285716
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Entry
101285716 CDS
T05247
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03082
ATP-dependent chromatin remodeling
oor04714
Thermogenesis
oor05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101285716 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101285716 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101285716 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oor03021
]
101285716 (SMARCA2)
03036 Chromosome and associated proteins [BR:
oor03036
]
101285716 (SMARCA2)
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101285716 (SMARCA2)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101285716 (SMARCA2)
Chromatin remodeling factors
BAF complex
101285716 (SMARCA2)
PBAF complex
101285716 (SMARCA2)
GBAF(ncBAF) complex
101285716 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
101285716
NCBI-ProteinID:
XP_049566823
LinkDB
All DBs
Position
6:complement(68036379..68209232)
Genome browser
AA seq
1575 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPSM
GSADFPQEGMHQMHKPIDGMHDKGVVEDIHCGSMKGTTMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPILGSGPTAPQMPPSQPGTLIPGDPQAMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQAAPQPQPPPQPQPPPPPQQQA
LVNYSRPSGPGPELSGPSPPQKLPVPAPSGRPSPAPPAAAPPPAAAVPGPSVPQPTPGQP
SPILQLQQKQSRISPVQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTK
ATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQ
QKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKET
ERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKE
KKKRRKKRKKAEENAEGEESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKAS
QLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAK
QIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWM
VSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKW
APSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHR
MKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNA
PFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQK
ILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGY
SNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLR
LDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQ
AQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRA
FLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLM
EEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLE
EMEEEVRLKKRKRRRNVDKDPAKEDMEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVI
NYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKER
IRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDE
SNEEEDEEEEDESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNRGKAKPVVSDFDSDEE
PDGNEQSEASGTDDE
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggtgcgatgccccacccagggccttcgccagggccggga
ccctctcctggaccaattcttgggcccagtccaggacctggaccatccccaggttccgtc
cacagtatgatggggccaagtcctgggcctccaagtgtctcacaccctatgccgtcgatg
gggtctgctgacttcccgcaggaaggcatgcatcaaatgcataagcccattgatggtatg
cacgacaagggagttgtggaagatatccactgtggatccatgaagggcaccactatgcga
cctcctcacccgggaatgggccctccccagagtccgatggaccaacacagccaaggctac
atgtcgccgcacccgtctccgctgggagcccccgagcacgtctccagccctatattggga
agtggcccaaccgcaccgcagatgccaccaagccagccagggaccctcatcccaggcgac
ccgcaggcgatgagccagcccaacagggggccctcgcctttcagtcccgtccagctgcat
cagctgcgagctcagattttagcttacaaaatgctggcccggggccagcccctcccggaa
acgctgcagctcgcggtccaggggaaaaggacgttgccgggcatgcagcagcagcaggca
gcacctcagccgcagccgccaccgcagccgcagccaccgccgccgccgcagcagcaggcc
cttgtcaactacagcaggccatctggcccggggccggagctgagcggcccgagcccccca
cagaagctgccggtgcccgcgcccagcggccggccctcgcctgcgccccctgcagcagcg
ccgccgcccgcggccgccgtgcccgggccctcggtgccacagccgaccccggggcagccc
tcgcccatcctgcagctgcagcagaagcagagccggatcagccccgtccagaaaccgcag
ggcctggaccccgtggagattctgcaggagcgggagtacagacttcaggctcgcatagcc
cataggatacaggaactggaaaatctccctggctctttgccaccagatttacgaaccaaa
gcaaccgtggaactgaaagcacttcggttactcaatttccagcgtcagttgagacaggag
gtagtggcctgcatgcgacgggacacgaccctggagacggccctcaactccaaagcatac
aaacggagcaagcgccagaccctgagggaagcccgcatgacggagaagctggagaagcag
cagaagatcgagcaggagaggaagcgtcggcagaagcaccaggaatacctgaacagtatt
ttgcagcatgcaaaagattttaaggagtaccatcggtctgtggctgggaagatccagaag
ctttccaaagcagtggccacttggcacgccaacactgaaagggagcagaagaaggagacc
gagcggatcgaaaaggagagaatgcggaggttgatggctgaagatgaagagggctataga
aaactgatcgatcaaaagaaagataggcgtttagcgtaccttttgcagcagacggatgag
tatgtggccaacctgactaatctggtttgggagcacaagcaagcccaggcggccaaagag
aagaagaagaggaggaagaagaggaagaaggctgaagagaatgcagagggggaggagtct
gccctgggaccagatggagagcccatagatgagagcagccagatgagtgacctccctgtc
aaagtgactcacacagaaaccggcaaggtcctgtttggcccagaagcacccaaagcaagt
cagctggatgcctggttggaaatgaatcctggttacgaagttgcccctagatcggacagc
gaagagagcgattctgattatgaggaggaggatgaagaggaagagtccagtaggcaggaa
actgaagagaaaatacttctggatccaaacagcgaagaggtttccgagaaggacgctaag
cagatcatcgagacagctaagcaagacgtggacgatgagtacagcatgcagtacagcgcc
aggggttcccagtcctactacacggtggcccacgccatctcggagagggtggagaagcag
tcggccctcctcatcaatgggaccctgaagcattatcagctccagggcctggaatggatg
gtttctctgtataataacaatttgaacggaatcttagctgatgaaatggggctgggaaag
accatacagaccattgcactcatcacttatctgatggagcacaaaagactcaatggcccc
tatctcatcattgttcccctttcgactctatctaactggacatatgaatttgacaaatgg
gctccttccgtggtgaaaatttcttacaagggcacccctgccatgcgtcgctccctcgtc
ccccagttacggagtggcaaattcaatgtcctcctgactacttatgagtacattataaaa
gacaagcacattcttgcaaagattcggtggaaatacatgatagtggacgaaggccaccga
atgaagaatcaccactgcaagctgactcaggttctgaacactcactacgtggcccccaga
aggatcctcttgaccgggacccccctgcagaataagctcccggagctctgggccctcctc
aacttcctccttcccacgatttttaagagctgcagcacatttgagcagtggtttaatgct
ccatttgccatgactggagaaagggtggacttaaatgaagaagaaactatattgatcatc
aggcgtctgcataaggtgttgagaccatttttactgaggagactgaagaaagaagttgaa
tcccagcttccagaaaaagttgaatatgtgatcaagtgtgacatgtcagctctgcagaag
attctgtatcgccatatgcaagccaaagggatcctcctcacagacggttcggagaaagat
aagaaggggaaaggaggcgctaagacacttatgaacactatcatgcagttgagaaaaatc
tgcaatcacccatatatgtttcagcacattgaggaatcctttgctgaacacctgggctat
tcaaatggggtcatcaatggggctgagctgtatcgggcctcaggaaagtttgagctactt
gatcgtattctgccaaaattgagagcgactaatcaccgcgtgctgcttttctgccagatg
acgtctctcatgaccatcatggaggattactttgcttttcggaacttcctttacctgcgc
cttgatggcaccaccaagtctgaagatcgtgctgctttgctgaagaaattcaatgaacct
gggtcccagtatttcattttcttgctgagcacgagagctggaggcctgggcttaaatctc
caggcagctgataccgtggtcatctttgacagcgactggaatcctcatcaggacctgcag
gcacaagaccgcgctcaccgcatcggccagcagaacgaggtccgcgtgctgagactctgc
accgtgaacagtgtggaggaaaagatcctcgcagccgccaagtacaagctgaacgtggat
cagaaagtgatccaggcaggcatgtttgatcagaagtcttcaagccacgagcggagggca
ttcctgcaagccatactggagcacgaagaggaaaatgaggaagaagatgaagtacccgac
gatgagactctgaaccaaatgatcgctcgacgagaggaggaatttgatctttttatgcgc
atggacatggaccggcggagggaggatgcccggaacccaaaacgcaagccccgcctgatg
gaggaggatgagctgccctcctggattattaaagatgacgccgaggtggaacggctgacg
tgtgaagaagaggaggagaagatcttcgggagggggtctcgccagcgccgggacgtggac
tacagcgacgccctcacagagaagcagtggctgagggccattgaagacggcaatttggaa
gaaatggaagaggaagtacggcttaagaagcgaaaaagacgaagaaatgtggataaagat
cctgcaaaagaagatatggaaaaggccaagaagaggagaggtcgccctccggctgagaaa
ctgtcaccaaatccccctaaactgacaaagcagatgaacgctatcatcgatactgtgata
aactacaaagacaggtgtaacgtggagaaggtgcccagtaattctcagttggaaatagaa
ggaaacagttcagggcgacagctcagtgaagtcttcattcagttaccttcaagaaaagaa
ttaccagaatactatgaattaattaggaaaccggtggatttcaaaaaaataaaggaaaga
atccgtaatcataagtaccgaagcctgggtgacctggagaaagacgtcatgctgctctgt
cacaatgctcagacgttcaacttggagggatcccagatctacgaagactccatcgtctta
cagtcggtgttcaagagtgctcggcagaaaattgccaaagaagaagagagtgaggacgag
agcaatgaagaggaggacgaggaagaggaagacgagtcagagtcagaggcaaaatctgtt
aaggtgaaaatcaagctcaataaaaaagatgacaaaggccgggacaaaggaaaaggcaag
aaaaggccaaatcgaggaaaagccaaacctgtggtgagcgattttgacagcgatgaagag
ccggatggaaatgaacagtcagaagctagtgggactgatgatgagtga
DBGET
integrated database retrieval system
