Orcinus orca (killer whale): 101285969
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Entry
101285969 CDS
T05247
Symbol
FXR1
Name
(RefSeq) RNA-binding protein FXR1 isoform X4
KO
K15516
fragile X mental retardation protein
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101285969 (FXR1)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101285969 (FXR1)
Factors involved in mRNA localization
Other mRNA localization factors
101285969 (FXR1)
mRNA cycle factors
Stress granule specific factors
101285969 (FXR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXR_C1
KH_9
FXMRP1_C_core
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
DUF150_C
Tudor_2
Motif
Other DBs
NCBI-GeneID:
101285969
NCBI-ProteinID:
XP_004278443
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Position
5:63200340..63257890
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AA seq
621 aa
AA seq
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MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGSRSYSGRGRGRRGPNYTSGYGTNSELSNPSETESERKDELS
DWSLAGEDDRESRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLKDPDSNPYSLL
DNTESDQTADTDASESHHSTNRRRRSRRRRTDEDAVLMDGMTESDTASVNENGLVTVADY
ISRAESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDEISKLQRTPGE
EKINTLKEENTQEAAVLNGVS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgacggtggaggttcgcggctccaacggggctttctacaagggatttatc
aaagatgttcatgaagactctctcacagttgtttttgagaacaattggcaaccggaacgc
caggttccatttaatgaagttagattaccaccaccacctgatataaaaaaagaaattagt
gaaggagatgaagtagaggtgtattcaagagcaaatgatcaagaaccatgtggatggtgg
ttggctaaagttcgaatgatgaaaggagaattttatgtcattgaatatgctgcttgtgat
gccacttacaatgaaatagtcacatttgaacgacttcggcctgtcaatcaaaataaaact
gtcaaaaaaaataccttctttaaatgcacagtggatgttcctgaggatttgagagaggcg
tgtgctaatgaaaatgcacataaagattttaagaaagcagtaggagcatgcagaattttt
taccatccagaaaccacacagctaatgatactgtctgccagtgaagcaactgttaagaga
gtaaatattttgagtgacatgcatttgcgaagtattcgtacgaagttgatgcttatgtcc
agaaatgaagaggccactaagcatttagaatgcacaaagcaacttgcagcagcttttcat
gaggaatttgttgtgagagaagatttgatgggcctggcaataggaacacatggtagtaac
atacaacaagctagaaaggttcctggagttacagctattgagctagatgaagatactgga
acatttagaatctacggcgagagtgctgatgctgtaaaaaaggctagaggttttttggaa
tttgtggaggattttattcaggttcctaggaatcttgttggaaaagtaattgggaagaat
ggcaaagttattcaagaaatagtagacaaatctggtgtggttcgggtgagaattgaagga
gacaatgaaaataaactacctagagaagatgggatggttccatttgtatttgttggcact
aaagaaagcattggaaatgtgcaagttcttttagagtatcatattgcttatctaaaggaa
gtagaacagctaagaatggaacgcctgcagattgatgaacagctacgacagattggttct
aggtcttatagtggaagaggcagaggtcgtcggggccctaattacacctccggttatggt
acaaactctgagctgtctaacccatctgaaactgaatctgagcgtaaagacgagctaagt
gattggtcattggcgggagaagatgaccgagagagccggcatcagcgtgacagcaggaga
cgcccaggaggaagaggcagaagtgtttcagggggtcgaggtcgtggtggaccacgtggt
ggcaaatcttccatcagttctgtgctcaaagatccagacagcaatccatacagcttactt
gataatacagaatcagatcagactgcagacactgatgccagcgaatctcatcacagtact
aaccgtcgtaggcggtctcgtagacgaaggactgatgaagatgctgttctgatggatggg
atgactgaatctgatacagcttcagttaatgaaaatgggctagtcacagttgcagattat
atttctagagctgagtctcagagcagacaaagaaacctcccaagggaaactttggctaaa
aacaagaaagaaatggcaaaagatgtgattgaagagcatggtccttcagaaaaggcaata
aatggcccaactagtgcttctggcgatgaaatttctaagctacagcgtactccaggagaa
gaaaagattaataccttaaaagaagaaaatactcaagaagcagcagtcctgaatggtgtt
tcataa
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