Orcinus orca (killer whale): 101286095
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Entry
101286095 CDS
T05247
Name
(RefSeq) nuclear RNA export factor 3 isoform X1
KO
K14284
nuclear RNA export factor
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03008
Ribosome biogenesis in eukaryotes
oor03013
Nucleocytoplasmic transport
oor03015
mRNA surveillance pathway
oor05014
Amyotrophic lateral sclerosis
oor05164
Influenza A
oor05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101286095
03015 mRNA surveillance pathway
101286095
03008 Ribosome biogenesis in eukaryotes
101286095
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101286095
05168 Herpes simplex virus 1 infection
101286095
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101286095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101286095
03009 Ribosome biogenesis [BR:
oor03009
]
101286095
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101286095
mRNA cycle factors
Stress granule specific factors
101286095
Ribosome biogenesis [BR:
oor03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101286095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
NTF2
Motif
Other DBs
NCBI-GeneID:
101286095
NCBI-ProteinID:
XP_049561153
LinkDB
All DBs
Position
X:complement(90160967..90544480)
Genome browser
AA seq
666 aa
AA seq
DB search
MKIYCLKALCDMPYLDNILYAGLSLVWPLPLRSTGSGHAGSAAMAHGPSRSAACGIFPDR
GTNPCPLHRQADSQPLRHRGSPKISIFDLTVYLCENIDQVNTLQRKARCRGIYRRRHNYW
SQQATSQQQQDRESLRSDAHVDIQARYAPYAIPSCHRRGNFQEQDETHVSKETEQKPPER
RMERSRQDETLGSWFKIRIPFGIKYDEKWLLNLIQKQCSVPFTPVEFHYEKMQAQFFVEN
ANIAFALKNVNGKIYNEANERISIFVDPCDAPHSVLKELRSEKVEQIKLPVKEQYDASQQ
SLDIQRVRSDPDLMTRDTGMARNPRTGVAASLQIHPGNMPKLLALDLSNKKPYQLHSLSN
TMPNASNTKNLNLSNTEVESAGEMDKGERLEPEGMCADRNPLCTTFPDMSTNISSILELF
PKLLTLDDQETSPLAKCGFEACKRLPTCKGSYFGSDELKSLVLQFLKQYYLIYDYGDRQV
LAGAYHEEACFSLTIPFHPEDPAPSSLCEYFKDSRNMKKLKDPHLRVQLLKHTKRVIVHT
LCVLPKTQHDFSSFVVDTWFQTETMLCFSVSGVFKEVEGSSQRCVHAFTRTFIATPSHDC
SLCIVNDELFVRDADPGETQSLFSIPLSTPTSSSMHPLSQQQQDIMQASSTPSESKGKIP
HVTLIH
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatattgtctgaaagcactgtgtgatatgccatatttggacaatatattgtat
gcgggcctctcactggtgtggcctctcccgttgcggagcacaggctccggacacgcaggc
tcagcagccatggctcacgggcccagccgctccgcggcatgtgggatcttcccggaccgg
ggcacgaacccgtgtcccctgcatcggcaggcggactctcaaccactgcgccaccgggga
agccccaaaatttcaatttttgacttgacagtttatctgtgtgagaacattgatcaagtg
aacactttacaaagaaaagcaagatgccggggtatttaccgaaggagacacaactattgg
tctcaacaggccacttcccagcagcagcaagatagagaatcactaagaagtgatgctcac
gtggacatccaagcaagatatgctccctatgccattccatcctgtcatcggagaggcaat
tttcaggaacaagacgaaacccatgttagcaaggagacagagcaaaagcctccagagaga
agaatggagagaagcaggcaggatgagaccttggggagctggttcaagatcagaattccc
ttcggtattaaatatgatgagaagtggctgctgaatttgattcagaagcaatgcagtgtc
cccttcaccccagtcgaatttcactatgagaaaatgcaggcccagttcttcgttgagaat
gccaacattgccttcgcactgaagaatgtcaatggcaagatttacaatgaggctaatgaa
aggatatctatctttgttgatccctgtgatgcaccccactctgtgctgaaggagctgagg
tcagaaaaggtggagcagataaagctgcccgtgaaggaacaatatgatgcctcccagcaa
tctcttgacatccagagagtccgctctgaccctgacttgatgacccgtgatactggaatg
gcacgaaaccctagaactggcgtggccgcctccctgcagatccatccagggaatatgccc
aagcttttggccttggacctgagcaataagaaaccctaccagctgcacagcctgtccaac
actatgccgaatgcttccaacaccaagaacttgaacctctccaacactgaggtggagtct
gcaggggagatggacaagggtgagcggctggagccagaagggatgtgtgcagacagaaac
cccctgtgcaccaccttccctgatatgtcaaccaacataagctccatcctggaattgttc
cccaagttactaacgttggatgaccaggagacatccccactggctaagtgtggttttgaa
gcctgcaagcgcttaccaacctgcaagggaagctactttggatctgatgagctgaagagc
ctagtcctgcaattcctgaagcagtactacttgatctatgactatggagacagacaggtt
ctcgcgggtgcttatcacgaggaggcctgcttctccctgacgattcccttccaccccgag
gacccagccccaagcagcttgtgcgagtatttcaaggacagcaggaatatgaagaaactc
aaggacccccacctgcgggtccagctgctgaagcacacaaaacgtgtcattgtgcacacc
ctctgtgtgttgcccaagactcagcatgacttcagctccttcgtggtggacacgtggttc
cagacggaaacgatgctctgcttctccgtcagcggggtgttcaaggaagtggaaggaagt
tctcagcgctgtgtgcatgctttcacccggaccttcatcgctaccccttcccacgactgc
agtctgtgcatcgtgaatgacgagctgtttgtgagggatgccgaccccggtgagacccaa
agtttgttctccatcccactgtctacacccacctccagctccatgcaccccctctcccag
cagcagcaggacatcatgcaggcatcctccaccccatctgagtccaagggcaaaattcca
catgtgaccctcatccactga
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