Orcinus orca (killer whale): 101286233
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Entry
101286233 CDS
T05247
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X6
KO
K16474
intraflagellar transport protein 88
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oor03037
]
101286233 (IFT88)
Cilium and associated proteins [BR:
oor03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
101286233 (IFT88)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_19
TPR_14
TPR_16
ANAPC3
TPR_11
TPR_10
ARM_TT21_4th
TPR_CcmH_CycH
TPR_21
ARM_TT21_C
ARM_TT21_2nd
HEAT_Nup120
RPN7
TPR-S
Coatomer_E
DUF6584
TPR_15
Motif
Other DBs
NCBI-GeneID:
101286233
NCBI-ProteinID:
XP_033265319
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Position
18:complement(77555343..77630509)
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AA seq
672 aa
AA seq
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MMENVHLAPETDEDDLYSGYNDYNPTFDTEELENDTAFQQAVKTSHGRRPPITAKIPSTA
VARPVATGCGSKTSLASSMGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSR
GPAPPLEARNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQITSPENINLDLTYSVLFNLASQYSANEMYPEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMS
VAPNLKAGFNLILSYFAVGDREKMKKAFQKLIAVPLETDEDGKYISPNDDPHTNLVIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEI
NKAIMYLRQKDFNQAVETLKMFEKKDSSVKSAAATNLSFLYYLENEFSQASSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTCKKLNRLDEALD
CFLKLHAILRNSAQVLYQIANIYELMEDPNQAMEWLMQLISVVPTDSRALSKLGGLYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSAQWI
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaatgtacacctggccccagagacagatgaagatgatctttattctggttat
aatgactacaatccaacctttgataccgaggaattggagaatgacacagcttttcagcaa
gctgtgaaaactagtcacggcagaagacctccaataactgctaaaataccaagcacagca
gttgctagacctgtagctactggatgtgggtccaagacatccctggcatcgtcaatggga
agaccaatgacaggggctattcaggatggagttactagacccatgacagcagtgagagca
gctggttttaccaaagcagctttgagaggctctgcgttcgaccccctcggtcagtcgcgg
ggccctgcaccgcccctggaggccaggaacgaagacagtccagaagaaaagataagacaa
ttagagaagaaagtaaatgagttggtagaagaaagctgtattgctaacagttgtggagac
ttaaaattggccttagaaaaggcaaaagatgcaggaagaaaagagagagtcctggtgaga
caacgagaacaaattacaagtccagaaaacatcaatttggatttaacttactcagttctt
ttcaacttggccagtcagtattcagctaatgaaatgtatcctgaagcactaaacacatat
caagttatagtgaaaaataagatgtttagcaatgcaggacggttgaaagtgaatatggga
aatatttatttaaagcaaagaaattattccaaagccattaaattctaccgaatggcctta
gatcaaattccaagtgtccataaagaaatgaggattaaaattatgcagaacattggagtt
acatttattaaaactgggcagtattcagatgccattaattcatttgagcacataatgagt
gtggcaccaaacctgaaggcaggcttcaacctaattcttagttactttgctgttggagat
cgagaaaaaatgaagaaggcattccaaaagctgattgctgttccattagaaactgatgaa
gatggtaaatacatttcaccaaatgatgacccacatactaatttagtgattgaagctata
aaaaatgatcatctaaggcaaatggaacgtgaaaggaaagccatggcagaaaaatacatc
atgacagctgcaaaactcattgctcctgtaattgaaacatcttttgctgtaggttatgat
tggtgtgttgaagttgtgaaagcttctcagtacgtagagctggcaaatgatctggaaata
aacaaagcaattatgtacctgagacaaaaggactttaatcaagctgtagagaccttaaaa
atgtttgaaaaaaaggacagtagtgtgaagagtgcagctgcaaccaacctctcattcctg
tattatttggagaatgaattctcacaagccagtagctatgcagatttagctgtgaactct
gacagatataacccgtcagctcttactaataaagggaatacagtttttgcaaatggtgac
tatgagaaggcagctgaattctataaagaggctctaagaaatgattcttcttgtactgaa
gcactttataatattggccttacctgtaagaagctaaaccggcttgatgaagctttggac
tgtttcctgaaacttcacgcaatcctaagaaacagcgcccaagtcctttaccagatagca
aatatatacgagttaatggaagatcccaatcaagctatggaatggttaatgcagctgatc
agtgttgttccaactgactccagagctttgtctaaactgggaggattatatgacagtgag
ggggataaatcccaagcattccaatattactatgagtcgtataggtatttcccgtccaat
attgaagtcatcgagtggcttggggcctattacatcgacacccagttttgtgaaaaagcc
attcagtactttgaaagagcttctcttatacagcctacacaagtgaagtggcagctgatg
gtagctagctgttttagaagaagtgcacagtggatttga
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