Orcinus orca (killer whale): 101286549
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Entry
101286549 CDS
T05247
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oor03041
]
101286549 (DDX1)
03016 Transfer RNA biogenesis [BR:
oor03016
]
101286549 (DDX1)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101286549 (DDX1)
Spliceosome [BR:
oor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101286549 (DDX1)
Transfer RNA biogenesis [BR:
oor03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
101286549 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
DUF5766
Motif
Other DBs
NCBI-GeneID:
101286549
NCBI-ProteinID:
XP_004274915
LinkDB
All DBs
Position
13:complement(80327369..80360798)
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKATIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDMDKGHVKFSKNGKDLGLAFEIPPHMKNQGLFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPDSFTVKSQHTGNAQVAQAKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKADRIWERLGKNHIRTDEVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EVEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttctccgagatgggtgttatgcctgaaattgctcaagctgtggaggagatg
gattggcttctcccaactgatatccaggctgagtccatcccactgatcctaggaggaggt
gatgtccttatggctgcagaaacaggaagtggaaaaactggtgctttcagtattccggtt
atccagatagtttatgaaactctgaaagaccaacaagaaggcaaaaaaggaaaagcgaca
attaaaactggtgcttcagtgctgaacaaatggcaaatgaacccatatgacagaggatct
gcttttgcaattgggtcagatggtctttgttgtcagagcagagaagtaaaggaatggcat
ggatgtagagctactaaaggattaacgaaagggaaacactactatgaagtatcctgtcat
gaccaaggattgtgcagagttgggtggtcttctatgcaggcttccctagacctaggtact
gacaagtttggatttggctttggtggaacaggaaagaaatctcacaataaacaatttgat
aattatggagaggaattcactatgcatgataccattggatgttacctagatatggataaa
gggcatgtcaaattctccaaaaatggaaaagaccttggcctggcatttgaaataccacca
catatgaagaaccaaggcctctttcctgcctgtgttttgaagaatgctgaactaaaattc
aacttcggggaagaagaatttaagtttccaccaaaagatggttttgttgccctttccaag
gcaccggatagtttcactgtcaaatcacagcacacaggtaacgctcaggtggcacaagcg
aagtttctccccaatgctccaaaagctctcattgtcgaaccttcccgagagttggctgaa
caaactttgaataacgtcaagcagtttaagaaatatgtcgataatcctaaattaagggag
cttctgataattggaggtgttgcagcacgggatcagctctctgttttggataatggggta
gatatagttgttggcactccaggaagactggatgatttggtgtcaactggaaagctgaac
ttatcccaagttagattcctggtcctggatgaagctgatgggcttctttctcaaggttac
tctgattttataaataggattcacaatcagattcctcagattacctctgatggaaaaaga
cttcaggtgattgtttgctcagccactttgcactcttttgatgtgaagaaactgtctgag
aagatcatgcactttcccacctgggttgatttgaaaggagaagattctgttccagatact
gtccaccatgttgttgtcccagtgaatcccaaagctgacagaatctgggaaaggcttggg
aaaaaccacattaggactgatgaagtacatgcaaaagataatacaagacctggtgcaaac
agtccagagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgagca
atcaaggaacacaagatggatcaagcaatcattttctgtagaaccaaaatcgactgtgat
aacttggagcagtattttatgcaacaaggaggaggacctgataaaaaggggcaccagttc
tcatgtgtttgtcttcatggtgacagaaagcctcatgagaggaagcaaaacttggaaaga
ttcaagaaaggagatgtaagattcttgatttgcacagatgtagccgccagaggaattgat
atccatggtgttccttatgttataaatgtcaccttgcctgatgaaaagcaaaactacgtc
catcgaatcggcagagtaggaagagctgaaaggatggggctggccatttccctggtggca
acagaaaaagagaaggtttggtaccacgtatgtagcagccgtggaaaagggtgttacaac
acaagactcaaggaagatggtggctgtaccatatggtacaatgagatgcagttgctgtct
gaggtagaagaacatctgaactgtaccatttcgcaggttgagccagatataaaggtacca
gtggatgaatttgatgggaaagttacttatggtcaaaaaagagctgctggtggtggaaac
tataaaggccacgtggatatcttggcacctacggttcaagagctggctgcccttgaaaag
gaggcacagacgtctttcctgcatcttggctatcttcctaaccagctgttcagaaccttc
tga
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