Orcinus orca (killer whale): 101286945
Help
Entry
101286945 CDS
T05247
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin isoform X1
KO
K06548
sialoadhesin
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101286945 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oor04090
]
101286945 (SIGLEC1)
04091 Lectins [BR:
oor04091
]
101286945 (SIGLEC1)
CD molecules [BR:
oor04090
]
Proteins
101286945 (SIGLEC1)
Lectins [BR:
oor04091
]
I-type lectins (Siglecs)
101286945 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_4
C2-set_2
C1-set
Izumo-Ig
Ig_CD22
C2-set
MG2
Motif
Other DBs
NCBI-GeneID:
101286945
NCBI-ProteinID:
XP_033271606
LinkDB
All DBs
Position
16:complement(30952857..30971839)
Genome browser
AA seq
1726 aa
AA seq
DB search
MDFPLQLLLLASSIPAGLTSWGVSSPQAVQGVRGSCLVIPCIFSFPASVEVPHGITTIWY
YDYSGNRQVVSHSGDPQLVEARFQGRALLVGRAEHKSCSLLLRDLQPEDAGSYNFRFEIS
EGNRWSDVTGTVVTVTEEPSMPTIASPAELREGMEVDFNCSTPYACLQEPVSLQWQGQDP
TRSVTSNLQKLEPTGIIHLETLHMALSWQDHGRTLRCQLSVAKHKTQGEIHLQVQYAPKG
VKILLSPSGRNILPGDLVTLTCQVNNSYPQVSSVQWVKDGTHLKDQSRVLQLPQAAWADA
GIYTCEAGNGVGSSVSPPVSLHVFMAEVQVSPAGSILENQTVTLACNTPKEAPSELRYRW
YKNHALMEDTHSRIFQLRSATRADTGFYFCEVQNAQGSERSGPVSVVVSHPPLAPDLTAF
LETQAGLVGILQCSVVSEPMATLVLSHGGLILASTSGEGDRSPRFSVSSAPNSLHLEIRD
LGPTDSGEYTCSATNSLGNASSTLDFHANAVRLLISPAAEVAEGQAVTLSCRSSLSPTPD
THFSWYRNGAFLLKGPSSSLLLPAASSTDAGSYHCWAQDGHSTSGPSSPAVLTVLYAPRQ
PMFTARLDLDTAGAGAGRRGLLLCRVDSDPPAQLRLLHRDRVVASSLPSGGSCSTCGGCS
QRTKVTRAPNLLRVEIQDPVLEDEGMYLCEASSLLGNASASATFDAQATVLVITPSHTLQ
EGTGANLTCRVDREAGGPANFSWFRDGALWAQGPLETLTLLPVTRRDAALYACRILTEAG
AQLSTPVVLSVLYPPDPPKLSALLDVDQGHTAVFICTVDSRPLAQLSLFHGEHLLATSSG
PRLSSRGHLQAKATANSLQLEVQDLSLADSGSYRCEATNVLGSANTSLFFQVRGAWVRVS
PSPELREGQAVVLSCQVPTGVLEGTSYRWYRDGQPLQEFTSATVHFAAITLSQAGAYHCQ
AQAPGSATTNLAVPVSLHVSYAPRQATLIPLMDTGPGRLGLLLCRVNSDPPAQLRLLHGD
LLVASTLQGVGELAGSSPRLQVAVAPNTLRLEIHNAVLEDEGVYTCEATNALGQASASAT
FDAQAVSVQVWPKATVQEGQLVNLTCLVWATHMAQLTYTWYQDGQQRPGAVHSIRLPNVT
VMDAASYRCGVLTPGQALHLSRPVTLDVLYAPRGMRLTYLLESRGGQLALVLCTVDSRPP
AQLALSHAGRLLVSSTTDSVPNTLRLELWEPRPSDEGLYSCSARSPLGQANMSLELRLEG
VQVTLAPSATVPEGAPVTVTCEDPAARPPTHYAWYHNSRWLQEGSAASLSFPMATRAHAG
AYTCQVQDAQGTRSSQPTALHVLYAPRDAILSSFWDSRASPMAVVQCTVDSEPPAELALS
RDGKVLATSHGVHGLAVGTGHVQVARNALRLRVQDVPSGDKDTYVCTARNLLGSISTMGQ
LQAEGVRVVAEPGLDVPEGTALNLSCHLPGSPGPMGNSTFAWFWNGRQLHTEPVPTLAFT
HVALAQAGMYHCRAELPTGATTSAPVMLRVLYPPKTPTMMVFVEPEGGVQGILDCRVDSE
PLASLTIHLGSRLVASSQPQVAPAEPHIHVSATPNALRVDIEELRPGDQGEYVCSASNAL
GSASAATYFGTRALHRLHLFQQLLWVLGLLAGLLFLLLGLGACYAWRRRHFHKLRVGENS
MEMASQKETTQGEEVTGICDDSGPVNKAALGPACLHENSPVAPDFL
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atggacttcccgctccagctcctcctcctggcctcatccatcccagcaggcctgacctca
tggggcgtctccagtccccaggctgtgcagggcgtaaggggttcctgcctcgtcatcccc
tgcatcttcagcttccctgccagcgtggaggtgccccacggcatcacaaccatctggtac
tatgactactcaggcaaccggcaggtagtgagccattccggggacccccagctggtagag
gcccgtttccaaggccgtgccctactggtggggcgtgccgagcacaagtcgtgcagcctg
ctgctgagagacctgcagcccgaggacgcgggctcctacaacttccgctttgagatcagt
gagggcaaccgctggtcagatgtcacaggcacagtggtcaccgtgacagaggagcccagc
atgcccaccattgcctcaccagctgagctgcgcgagggcatggaggtggacttcaactgc
tccactccctacgcgtgcctgcaggagccagtcagtctgcagtggcaaggccaggacccc
acccgctccgtcacctccaacctccagaagcttgagcccacgggcatcatccacctggag
accctccacatggccctgtcctggcaggaccatggccggaccctgcgctgccagctctcg
gtggccaaacacaagactcagggcgagattcacctccaagtgcagtatgcccccaagggt
gtgaagatcctcctcagcccttcggggcgaaacatccttccaggtgatctggtcacactc
acctgccaggtgaataacagctaccctcaggtcagttccgtgcagtgggtcaaggatggg
acgcacctcaaagaccagagtcgtgtactacagctgccccaggcagcctgggccgatgct
ggcatctacacctgtgaagctgggaatggcgtgggctcttcggtctcaccccctgtcagc
ctccacgtcttcatggctgaggtccaggtgagcccagcaggctccatcctggagaaccag
acagtgacgttggcctgcaacacacctaaagaagcgcccagcgagctgcgctacaggtgg
tacaagaaccacgccctgatggaggacactcacagccgcatcttccagctgcgctcagcc
accagggctgatacaggcttctacttctgtgaggtgcagaatgcccagggcagcgagcgc
tctggcccggtcagcgtggtggtcagccacccacccctcgccccggacctaactgccttc
ctggagacacaggcaggactggtgggcatcctccagtgctctgtggtcagcgagcccatg
gctactctggtgttgtcacatgggggcctcatcctggcctccacttctggggagggtgac
cgcagcccacgcttcagtgtctcctctgcccccaactccctgcacctggagattcgagac
ctggggccaactgacagcggagagtacacgtgctcagccaccaactctcttgggaatgcg
tcctccactctggacttccatgccaatgcagtccgcctcctcatcagcccggcagcagag
gtggcagaagggcaagcagtgacactgagctgtaggagcagcctaagcccgacacctgac
acacacttctcctggtaccggaatggggccttccttctcaagggccccagcagcagcctt
ctgctccctgctgcctccagcactgacgccggctcataccactgttgggcccaggatggc
catagcaccagcgggccctcctcacctgctgtccttaccgtcctctatgccccacgccag
cccatgtttaccgcccggctggaccttgatactgcaggagctggggctggacggcgaggc
ctcctcttgtgccgtgtggacagtgacccccccgcccagctgcggctgctccacagggac
cgtgtcgtggcctcttccctgccatccgggggcagctgtagcacctgtgggggctgctcc
caacgcacaaaagtcaccagggcccccaacctgctgcgtgtagagatccaagacccggtg
ctggaagacgagggcatgtacctgtgcgaggccagcagtctcctgggcaatgcctctgcc
tcggcgaccttcgatgcccaggccactgtcctggtcatcacaccatcgcacacgctgcag
gagggcactggagccaatctgacttgcagggtggaccgggaagccggtggccctgccaac
ttctcctggttccgggatggggcactgtgggcccagggccccctggagaccctgacgctg
ctgcctgtgaccagaagggatgctgccctgtatgcctgccgcatcctcaccgaggctggt
gcccagctctccacccctgtggtcctgagtgtgctctatcccccagatcctccaaagctg
tcagctctcctggatgtggaccagggccacacggctgtgttcatctgtactgtggacagt
cgccctcttgcccagctgtctctgttccatggggagcacctcctggccaccagctcaggg
ccccggctctcatcccgtggccatctccaggccaaagccacggccaactccctgcagcta
gaggtccaagacttgagcctggcagactctggcagctaccgctgtgaggccaccaatgtc
ttgggatcagccaacacttccctcttcttccaggtccgaggagcctgggtccgggtgtca
ccatcgcctgagctccgagagggccaggctgtggtcttgagctgccaggtacccacaggg
gtcctggaggggacctcataccgctggtatcgggatggccagcccctccaggagttcacc
tcggccacagtccattttgcagccataactttgagccaagctggggcctaccattgccaa
gcccaggctccaggctcagccaccacgaacttggctgtccccgtcagcctccacgtgtcc
tatgcccctcgccaggccacactcatccccctgatggacacaggccctgggcgactgggc
ctcctcctgtgccgtgtgaacagcgaccctccagcccagctacgactgctccacggggac
ctcctcgtggcctctaccctacaaggtgtgggggagcttgcaggcagctctccccggcta
caggtggctgtggcccccaacacgctgcgtctggagatccacaatgcagtgctggaggat
gagggcgtttacacctgcgaggccaccaacgccctgggccaggcctcggcctcagccacc
tttgatgcccaggctgtgagtgtgcaggtgtggcccaaagccaccgtacaggaggggcag
ctggtgaacctgacctgccttgtatgggctacccacatggcccagctcacctatacatgg
taccaagatgggcagcagcgcccaggtgctgtccactccatccgcctgcccaacgtcacg
gtcatggatgctgcctcctaccgctgtggcgtgttgacccctggccaggcactccacctc
tccagacccgtcaccctggacgtcctctatgcaccccgcggcatgcgcctgacctatctc
ctggagagccgcggcgggcagctggccctggtgctgtgcacagtggacagccgcccacct
gcccagctagccctcagccacgctggccgtctcctggtgtcctcgaccacagactctgtc
cccaacaccctgaggctggagctgtgggagcctaggcccagtgatgagggtctctacagc
tgctcggcccgcagtcctctgggtcaggccaacatgtccctggagctgcggctagagggt
gtgcaggtgaccctggctccgtcagccactgtgcccgagggagcccctgtcacagtgact
tgtgaagaccctgctgcccgcccacccacccactatgcctggtaccacaacagtcgttgg
ctgcaggaggggtcagctgcctcgctctcgttcccgatggctacacgggctcacgcgggt
gcctacacctgccaggtccaggatgcccagggcacacgcagctcccagcccacagcgctg
catgtcctctatgcccctcgggacgctatcctgtcctccttctgggactcaagggccagc
cccatggccgtggtacagtgcactgtggacagcgagccacctgccgagctggccctgtcc
cgcgatggcaaggtgctggccaccagccacggggtccacggcttagcagtggggacgggc
cacgtccaggtggcccgcaacgccctgcggctgcgggtgcaagatgtgccctcaggtgac
aaggacacctacgtctgcacggcccgtaacttgttgggctcaatcagcaccatggggcag
ctgcaggcagaaggtgtgcgcgtggtggctgagccagggctggatgtgcctgagggcaca
gcgctgaacctgagttgtcacctccctggcagccctgggcccatggggaactctaccttt
gcttggttctggaatggccggcaactacacacagagcctgtgcccaccctcgccttcact
catgtggccctcgcccaagctgggatgtaccactgccgggctgagctccccactggggcc
accacctctgctccagtcatgctccgggtgctctaccctcccaagacacccaccatgatg
gtttttgtggagcccgagggtggcgtccagggcattctggactgccgagtggacagcgag
cccctagccagcctgaccatccaccttggcagtcggctggtggcctccagccagccccag
gttgctcctgccgagccacacatccacgtctcagccacccctaatgccttgagggtggat
atcgaggagctgaggcctggtgaccagggggaatatgtgtgctctgcctccaatgccctg
ggctctgcctctgctgccacctactttggaaccagagccctgcatcgcctgcatctgttc
cagcagctactctgggtcctggggctgctggcaggcctcctcttcctactgttgggcctg
ggggcctgctacgcctggagaaggaggcattttcataagctgagagtgggtgaaaattca
atggagatggcttctcagaaggaaaccacacagggggaggaggttaccggaatctgtgac
gactcgggccctgtgaacaaggcagcgttgggtcctgcctgcctccatgaaaacagccct
gtggcacctgactttctatga
DBGET
integrated database retrieval system