Orcinus orca (killer whale): 101287224
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Entry
101287224 CDS
T05247
Symbol
CHSY1
Name
(RefSeq) chondroitin sulfate synthase 1 isoform X1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oor01100
Metabolic pathways
Module
oor_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
101287224 (CHSY1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oor01003
]
101287224 (CHSY1)
Enzymes [BR:
oor01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
101287224 (CHSY1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
101287224 (CHSY1)
Glycosyltransferases [BR:
oor01003
]
Glycan extension
O-Glycan
101287224 (CHSY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
101287224
NCBI-ProteinID:
XP_012389164
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All DBs
Position
2:complement(76332226..76407150)
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AA seq
803 aa
AA seq
DB search
MAVRGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGPRLRASPEGCRPGQAAAASHAG
GARGDARGEQLWPHGRAQDGGPHDSNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVEF
FSSEGSDTSIPIPIVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGD
RLENFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHI
GKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHNSKIHR
AITLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIVLMSKYSNTEIHKEDLQLGIP
PSFMRFQPRQREEILEWEFLTGKYLYSAADSQPPRRGMDSAQREALDDIVMQVMEMINAN
AKTRGRVIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSK
IQFVEHEELDAKELANRINQESGSLSFLSNSLKKLVPFQLPGSKDEHKEPKEKKINILIP
LSGRFDMFVRFMGNFEKTCLIPNQNVRLVVLLFNSDSNPDKAKQVELMRDYRIKYPKADM
QILPVSGEFSRALALEVGSSQFNNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPII
FSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVQVGGFDVSIQGWGLE
DVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAE
MWLEKNDPNYSKSSNNNGSVRTA
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcgcggccggcgcgcctggctcagcgtgctgctcgggctcgtgctgggtttc
gtgctggcctcgcggctcgtcctgccccgcgcctccgagttgaagcgagcgggcccacgg
ctccgcgccagtcccgagggctgccggcctgggcaggcggccgcggcttcccatgccgga
ggggcgcgcggggatgcgcgcggggagcagctctggccgcacggcagggcccaggatggc
ggcccgcacgacagcaactttctcttcgtgggagtcatgaccgcccagaaatacctgcag
acccgcgcggtggctgcctacagaacatggtccaagacaattcctgggaaagtcgaattc
ttctctagtgagggttcagacacatcgatcccaattccaatagtgccactacggggagtg
gacgactcctacccaccccagaagaagtcttttatgatgctcaagtacatgcatgaccac
tacttggacaagtatgaatggtttatgagagcagacgatgatgtttacatcaaaggagac
cgtctggagaattttctgaggagtttgaatagtagtgaacccctctttcttgggcagaca
ggactgggcaccacggaagaaatggggaaacttgctctggaacctggtgagaacttctgc
atggggggccctggtgtgatcatgagccgggaagttctccggagaatggtaccacacatc
ggcaagtgcctccgggaaatgtacacaacccacgaggatgttgaggtgggaaggtgtgtc
cggaggtttgcaggggtgcagtgcgtctggtcttatgagatgcagcagcttttttatgag
aattatgaacagaacaagaaggggtacattagagatctccataacagtaaaattcaccga
gccatcacactgcaccctaacaaaaacccaccctaccagtacaggctccacagctacatg
ctcagccgcaagattgctgagcttcgacaccgcaccatccagctgcaccgagagattgtc
ctgatgagcaaatatagcaacaccgagattcataaagaagacctccagctgggaattcct
ccttccttcatgaggtttcagccccgccagcgagaggagattctggagtgggagtttctg
actgggaaatatttgtattcggctgctgacagccaaccccctcgaagagggatggactcc
gcgcagagggaggccttggatgacattgtcatgcaggtcatggagatgatcaatgccaac
gccaagaccagagggcgcgttattgattttaaggagatacagtacggctatcgccgagtg
aatcccatgtacggggccgagtacattctggacctgctgcttctgtacaaaaaacacaaa
ggaaagaaaatgacggtgcctgtgcggaggcatgcgtacttacagcagaccttcagcaag
atccagtttgtggaacacgaggagctggatgcaaaggaactggccaacagaatcaatcaa
gaatccggatccttgtcctttctctcgaattccctgaagaagcttgttccctttcagctc
cctgggtccaaggatgagcacaaagaacccaaagagaaaaagatcaatatattgattcct
ttgtctggacgttttgacatgtttgtgagattcatggggaactttgagaagacatgtctc
attccgaatcagaatgtcaggctcgttgttctactctttaattctgactccaaccccgac
aaggccaagcaagttgaactcatgagagattaccgcattaagtacccgaaagccgacatg
cagattttgcctgtgtctggagaattttcaagagctctggccctagaagtgggatcttcc
caatttaataatgaatctttgctcttcttctgtgacgttgaccttgtatttactacagaa
tttcttcagcgatgtcgagcaaatacagttctgggccaacaaatatattttccaatcatc
tttagccagtacgatcctaagattgtttatagtgggaaggttcccagtgacaaccatttt
gcctttactcaaaaaactggcttctggagaaactatgggtttggcattacttgtatttat
aagggagatctcgtccaagtaggtggctttgatgtttctatccaaggctgggggctcgag
gatgtcgaccttttcaacaaggttgtccaggcaggtttgaagacatttaggagccaagaa
gtaggagtagtccacgtccaccatcctgtcttttgtgatcccaaccttgatcccaaacag
tacaaaatgtgcttggggtccaaagcatcaacatatgggtccacacagcagttggctgaa
atgtggctagaaaaaaatgacccaaattacagtaaaagcagcaataataatggctcagtg
aggacagcctaa
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