Orcinus orca (killer whale): 101287612
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Entry
101287612 CDS
T05247
Symbol
MEX3D
Name
(RefSeq) RNA-binding protein MEX3D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101287612 (MEX3D)
04121 Ubiquitin system [BR:
oor04121
]
101287612 (MEX3D)
Enzymes [BR:
oor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101287612 (MEX3D)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101287612 (MEX3D)
Ubiquitin system [BR:
oor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101287612 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
zf-RING_4
RING_XB3-XBAT31
zf-C3HC4
KH_PNO1_2nd
Prok-RING_4
KH_DEAH11_2nd
Motif
Other DBs
NCBI-GeneID:
101287612
NCBI-ProteinID:
XP_012394548
LinkDB
All DBs
Position
3:complement(949479..958430)
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AA seq
665 aa
AA seq
DB search
MPSSTGQPDGGGGKRSGGPGAAVGGDPSPGPPPPPPPPPPPPPPPEGAEEAAPAPRPPPE
PDDAAAALRLALDQLSGLGLGGAGDQDEEGAAAGGGDGAVAAARGADCGAAAEPAPPDGP
EAGAPGVAVAPGPLPLLEPDVSPPPPPRPSPPDVFAGFAPHPAALGPPTLLAEQMSVIGS
RKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKED
VEMAKREILSAAEHFSVIRATRSKAGGLPGTAQGPPNLPGQTTIQVRVPYRVVGLVVGPK
GATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEIEAHITLRTGAFADTGPDS
DFHSNGTDVCLDLLGAATGLWAKAPNPGRRPPAPTASLRGDAALGTPGGSEAFYAGGRGG
PTMPVPDADPTSPYGASGNGGFTFGGDGPGAPAGPPAPEDCDFGFDFLALDLTVPTAATI
WAPFDRAPPLPAFSGCAAVNGAPAPPAAGARRSSGAGTPRHSPTLPEPGGLSLELPLARR
AAPDPVGALPWRPPQGSLASFSSSASFSTATSLPGSSSASSCSALDSSASESGRKPQAAP
APNAPASAALARECVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQA
IHIFS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctccaccggacagcccgacggcggcgggggcaagcgcagcggcggacccggg
gcggcggtcgggggggaccccagcccgggccccccgccgccgccgccgccgccgccgccg
cccccgcccccgcccgagggcgccgaggaggccgcgcctgcgccccggccgccgcccgag
cccgacgacgcggccgccgcgctgcgcttggccctggaccagctctcagggctcggtctg
gggggcgcgggcgaccaggacgaggagggggcggccgcgggcggcggggacggagcggtg
gcggcggcgcgaggcgcagactgcggggccgcggcggagcccgcgccccccgacgggccc
gaggcgggcgcgcccggggtagccgtggcccccggcccgctgccgctgctggagcccgac
gtgagccccccgccgccgcctcggccatcgccgcccgacgtgttcgcgggcttcgcgccc
cacccagcggccctgggtcccccgacgctgctggccgagcagatgagcgtgatcggcagc
cgcaagaagagcgtgaacatgaccgagtgcgtgcccgtgcccagctccgagcacgtcgcc
gagatcgtgggtcgccaggggtgcaagatcaaggctctgcgcgccaagacgaacacgtac
atcaagacaccggtgcgtggggaggagccggtctttatcgtgaccggccgcaaagaggac
gtggagatggccaagcgtgagatcctgtcggccgccgagcacttctccgtgatccgcgcc
acgcgcagcaaggcaggcgggctgcccggtaccgcgcagggcccgcccaacctgccggga
cagaccaccatccaggtgcgcgtgccctaccgcgtggtggggctggtggtgggccccaag
ggcgccaccatcaagcgcatccagcagcggacgcacacgtacatcgtgacgcccgggcgc
gacaaggagccggtgttcgctgtgacgggcatgcccgagaacgtggaccgggcgcgcgag
gagatcgaggcccacatcacgctgcgcacgggagccttcgctgacaccggccccgacagc
gacttccactccaacggcaccgacgtctgcctggacctgctcggggcagccacgggcctc
tgggccaaggcccccaacccgggccgccggccccccgcgcccacggccagcctccggggg
gacgctgctctgggcaccccggggggctccgaggccttctatgcgggcggccgagggggg
ccgaccatgccggtgccggacgcggaccccaccagcccctacggcgcctcgggcaacgga
ggcttcaccttcggtggggacggtccgggggcccccgcggggccacccgcccccgaggac
tgcgacttcggcttcgacttcctggcgctggacctgaccgtgcccaccgcggccaccatc
tgggcgccctttgatcgggccccgcccctgcccgccttcagcggctgcgccgccgtcaac
ggggcccccgcgccgcccgccgcgggcgcccggcgcagcagcggggctggcacaccacga
cactcgcccacgctgcccgagcccggcggcctgagcctggagctcccgctggcccgccgc
gctgcgcccgacccggtgggcgccctgccctggcggcccccgcagggctccctggcatcc
ttctcgagcagcgccagcttctccacggccacctcgctgcccggcagctcctcggcctcc
tcgtgctccgcgctggactcgagcgcctcggagagtggccgcaagccccaggcggccccg
gcccccaacgcccccgcttccgcggctctggcgcgggagtgcgttgtgtgtgcagagggt
gaggtgatggccgcgctggtgccctgcggccacaacctcttctgcatggactgcgctgtc
cgcatctgcggcaagagcgagcccgagtgcccagcctgccgcacacctgccacccaggcc
attcatatcttttcctag
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