Orcinus orca (killer whale): 101287720
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Entry
101287720 CDS
T05247
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X4
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03022
Basal transcription factors
oor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101287720 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
101287720 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oor03021
]
101287720 (ERCC2)
03036 Chromosome and associated proteins [BR:
oor03036
]
101287720 (ERCC2)
03400 DNA repair and recombination proteins [BR:
oor03400
]
101287720 (ERCC2)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101287720 (ERCC2)
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101287720 (ERCC2)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101287720 (ERCC2)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101287720 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
101287720
NCBI-ProteinID:
XP_004271217
LinkDB
All DBs
Position
20:complement(49398076..49416697)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLSFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYIRAQYQRDPSLPHCRFYEEFDVHGRQVPLPAGIYNLDDL
KAMGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASTARE
TDAHLANPVLPDEVLKEAVPGSIRTAEHFLGFLRRLLEYIKWRLRVQHVAQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLESEETLRRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctgctggtctacttcccatacgactacatctacccggag
cagttctcctacatgctggagctcaaacgcacgctggatgccaagggtcatggagtcctg
gagatgccctcaggcactgggaagacagtgtccctgttggccctgatcatggcataccag
cgggcatatccactggaggtgactaaactcatctactgttcgaggactgtgcctgagatt
gagaaggtgattgaagaacttcgaaagttactcaacttctatgagaaacaggagggcgag
aagctgtcgtttttggggctggctctgagctcccgaaagaacctgtgtattcatcccgag
gtgacgcccctgcgctttgggaaggacgtcgacggaaaatgccacagcctcacggcctcc
tacataagggcacagtaccagcgggaccccagcctgccccactgccgcttctacgaggaa
tttgatgtccatgggcgccaggtgcccctccctgctggcatctacaacctggacgacctg
aaggccatggggcggcgccagggctggtgcccatacttccttgcccgatactcaatcctg
cacgccaacgtggtggtctacagctaccactacctcctggaccccaagattgccgacctg
gtgtccaaggagctggcccgcaaggccgtcgtcgtcttcgacgaggcccacaacattgac
aatgtctgcatcgactccatgagtgtcaacctcacccgccggaccctggatcggtgccag
ggcaacctggagaccctgcagaagacggtgctcaggatcaaggagacggacgagcagcgt
ctgcgggacgagtaccggcgcctggtggaggggctgcgggaggccagcaccgcccgggag
accgacgcccacctggccaaccccgtgctgcccgacgaggtgctgaaggaggcggtgccg
ggctccatccgcacggccgagcacttcctgggcttcctgcggcggctgctggagtacatc
aagtggcggctgcgcgtgcagcacgtggcgcaggagagcccgcccgccttcctgagcggc
ctggcccagcgcgtgtgcatccaacgcaagcccctcaggttctgcgccgagcgcctccgc
tcgctcctgcacaccttggagatcgcggatctcgccgacttctcccctctcaccctcctg
gctaacttcgccacgctcgtcagcacctacgccaagggtttcaccatcatcattgagccc
tttgacgacaggaccccaaccatcgccaaccccatcctgcacttcagctgcatggacgcc
tcgctggccatcaaacctgtgtttgagcgcttccagtccgtcatcatcacatctgggacg
ctgtccccgctggacatctaccccaagatcctggacttccaccccgtcaccatggcaacc
ttcaccatgacattggctcgggtctgcctctgccccatgatcattggccgtggcaatgac
caggtggccatcagctccaagtttgagacccgggaagatatcgcggtgatccggaactac
ggaaacctcctgctggagatgtccgctgtggtgcccgatggcatcgtggccttctttacc
agctaccagtacatggagagcaccgtggcctcctggtacgagcagggcatcctcgagaac
atccaaaggaacaagctgctctttattgagacccaagatggggctgagaccagtgttgcc
ctggagaagtaccaggaggcctgcgagaacggccgtggggccatcctgctctcggtggcc
cgaggcaaagtgtctgagggaattgactttgtgcaccactacggccgggccgtcatcatg
ttcggggtgccctacgtctacacccagagccgcattctcaaggcgcggctggaatacctt
cgggaccagttccagattcgagagaacgactttctgaccttcgatgccatgcgccacgca
gcccagtgcgtgggtcgggccatcaggggcaagactgactacggcctcatggtctttgcc
gacaagcgctttgcccgggccgacaagcggggcaaactgccccgctggatccaggagcac
ctcaccgacgccaacctcaacctgaccgttgacgagggggtccaggtcgccaagtacttc
ctgaggcagatggcacagccattccaccgggaggatcagctgggcctgtccctgctcagc
ctggagcagctggagtcggaggagacgctgcggaggatagagcagatcgctcagcagctg
tag
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integrated database retrieval system
