Orcinus orca (killer whale): 101287845
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Entry
101287845 CDS
T05247
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oor03041
]
101287845 (DDX20)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101287845 (DDX20)
Spliceosome [BR:
oor03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
101287845 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF7136
AAA_30
Motif
Other DBs
NCBI-GeneID:
101287845
NCBI-ProteinID:
XP_004263235
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All DBs
Position
1:complement(114545504..114555906)
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AA seq
824 aa
AA seq
DB search
MATAFEGSAALKTVESSMPAERVAAQFAAPEPAIRPVRSLRTAHDINSPRTRTGDVLLAE
PGDFESLLLSRPVVEGLRAVGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKVVSSYPLAHKIFEEKTQHL
QELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKQFHC
RVLVSTDLTSRGIDAENVNLVVNLDVPLNWETYMHRIGRAGRFGTLGLTVTYCCRGEEEN
MMMKIAQKCKINLQPLPDPIPPGLMEECLDWDVEVEAAMHTYGLASIPTQTLKQIQKIES
TFQTQKAHGNHMASSRNTSVSALSVKSKNNTKQKLPVKSHSECGIVEKAMSPKELGCAVQ
LEEQMKNSIQASVENSTNSQHQVKEASVSLPKIPCLSSFKTHLPCTLTFAELMEDYEHYI
KEGLEKPVEVIRHYTGPGDQTVNPQNGFVRNRITEERVQILASSSQSGDSESDSDSYSSR
SSSQSKGSKSYLEGSSDTQLKDLESIPVGGHISLEQPLNGNDTPHLVEYQESPEIKIKTR
HKEGANHNQRAKQSQRSLPRRSSYRLQAEPQEDGWYDRHRETHPSFSDTYQDYEEYWRAY
YRAWQEYYASASQSYYWNAQRHPGWMAAYHMNTVYLQEMMRGNQ
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcttttgaaggctcggcggccttaaagaccgtggagagcagtatgccggcg
gagcgcgtggctgcgcagttcgcggccccggagccagccatccggccagtgcggagtctg
cggacggctcatgacatcaacagtccgcggacccgcaccggggacgtgctgctggcggag
ccgggggacttcgagtcgctgctgctgtcgcggccggtggtggaggggctgcgggcggtt
ggcttcgagcggccgtcgcccgtgcaactcaaggccataccgctggggcggtgtgggctt
gatttaattgttcaagctaagtctggcactgggaaaacctgtgtattctccaccattgct
ttggactctcttgttcttgaaaacctaagtacccagattttgatcttggctcctacaaga
gaaattgctgtacagatacattctgttatcacagccattggaataaaaatggaaggctta
gagtgtcatgtgtttatcggagggactccattatcacaagacaaaaccagacttaaaaag
tgtcatattgctgttggttctcctggcagaattaaacaactgatagaacttgactacttg
aatccaggcagtatacgtctctttattcttgatgaagcagataagcttttagaagaaggc
agcttccaggagcaaataaattggatttattcttccttgcctgccagtaagcagatgttg
gcagtgtcagctacttaccctgaatttttggctaatgctttgacaaagtacatgagagag
cccacttttgtaagactaaactccagtgatccgagtctcataggtttgaagcagtactac
aaagttgtcagttcataccctttggcccataagatttttgaggaaaagactcagcattta
caagaattgttcagcaaaattccatttaatcaggccttagtcttttctaatttacacagc
agagcacaacacttggctgatatcctttcttctaaaggctttcctgcagagtgcatttca
ggcaacatgaatcagaatcagcgtcttgatgctatggctaaactgaagcagtttcattgc
agagtcctcgtttccacagatttgacttcccgtggaattgatgctgagaacgtgaatctg
gttgtaaacctggatgttccattgaattgggagacatatatgcatcggattggcagagct
ggccgttttggtactttgggactgacagtgacctactgctgtaggggagaagaagaaaat
atgatgatgaaaattgcccagaaatgtaagatcaatcttcagcctttaccagatcctatt
cctcctggtctgatggaagaatgtttggattgggatgtggaggttgaagctgccatgcat
acatatggcttagcaagtatacctacacagaccctaaaacaaattcaaaaaatagagagc
acctttcaaactcagaaagctcatggtaaccacatggcttcatctagaaatacttctgta
tctgcactatcagtcaaatcaaaaaataataccaaacaaaagcttcctgtgaaaagccac
tcagagtgtggaattgtagaaaaagccatgtcaccaaaagaactgggctgtgccgtacaa
ttggaagagcaaatgaagaattctattcaggcctctgttgaaaactctactaacagtcag
caccaagtcaaagaagcttctgtgtcactccccaaaattccctgtctgtcttcctttaaa
acccatctgccatgtactttgacttttgcagaattgatggaggattacgaacactatatt
aaagaggggttagagaaacctgtagaagtcatcagacactacacaggtcctggggatcag
actgtgaatcctcaaaatggttttgtgagaaatagaattactgaagagagagtgcagata
ttggcaagtagtagccaatctggagactctgagagtgacagtgattcttacagttcaagg
agttcttcccagagcaaaggaagtaagtcatacttggaaggttcttctgatactcagctg
aaagacttggaatctattcctgtgggtggccatatctctttggaacaacctctgaatgga
aatgacacccctcatctagtagagtatcaagaatcacctgaaatcaaaataaagacaagg
cataaagagggagctaaccataaccagagagctaagcagagccagagaagccttcccagg
cggtcttcctatcgattgcaggcagaaccccaggaagatggttggtatgaccgccatagg
gaaacacatccgagtttttctgacacctatcaggactatgaggagtactggagagcttac
tacagggcgtggcaggaatactatgcttctgcgtctcagtcgtattattggaacgctcag
aggcatccaggctggatggcagcctatcacatgaataccgtttatctacaagaaatgatg
cgtggcaaccagtga
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