Orcinus orca (killer whale): 101288257
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Entry
101288257 CDS
T05247
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF2-like
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101288257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oor03041
]
101288257
Spliceosome [BR:
oor03041
]
Complex B
Other components
Prp19-related factors
101288257
Complex C
101288257
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
101288257
NCBI-ProteinID:
XP_033262982
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Position
17:18990911..18991808
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AA seq
252 aa
AA seq
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MAAATVAEKVPVDGAEEQQPPAAAEELAAQKHEQRLRKFRELHLKRFLRLWFXNEARKLN
HQEVVEEDKRLKLPANWEAKKARLEWELQEEEKKKECAARGEDYEKVKLLEISAEDADRW
ERKKRRKNPDLGFSDYAAAQLRQYHRLTKQIKPDMETYERLREKHEEEFYPTSNSLLHGT
HVPSTEEIDRMVVDLEKQIEKRDKYSRRRPYNDDADIDYINERNAKFNKKAEKFYGKYTA
EIKQNLERGTAV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcgactgtagcagagaaggtgccggtagatggcgcggaggaacagcagccc
cctgcggcggccgaggagctggccgcccagaagcacgaacagagactgcgcaaattccgg
gagctgcacctgaagcggtttttgcgtttatggttttagaatgaagctcgtaaattaaat
caccaggaagttgttgaagaagataaaagacttaagttacctgcaaattgggaagccaaa
aaagctcgtttggaatgggaactacaagaagaagaaaagaaaaaggaatgtgcagcaaga
ggggaagactacgagaaagtgaagttgctagagatcagtgcagaagatgcagacagatgg
gagaggaaaaagaggaggaaaaatcccgacctgggattttcagattatgctgctgcccag
cttcgccagtaccatcggctgaccaaacagatcaaaccggacatggaaacatatgagaga
ctgagagaaaagcatgaggaagagttttacccaacatccaacagtcttcttcatgggaca
catgtgccttccacagaggaaattgataggatggtcgtagacctggaaaaacaaattgaa
aaacgagacaaatatagtcggagacgtccctataatgatgatgcagatattgactacatt
aatgaaaggaatgccaaattcaacaagaaggcagaaaaattctatgggaaatatacagct
gaaattaaacagaatttggaaagaggaacagctgtctaa
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