Orcinus orca (killer whale): 101288322 Help Entry 101288322         CDS       T05247                                  Symbol CDH1 Name (RefSeq) cadherin-1 isoform X1   KO K05689   cadherin 1, type 1, E-cadherin Organism oor  Orcinus orca (killer whale) Pathway oor04015   Rap1 signaling pathway oor04371   Apelin signaling pathway oor04390   Hippo signaling pathway oor04514   Cell adhesion molecules oor04520   Adherens junction oor05100   Bacterial invasion of epithelial cells oor05200   Pathways in cancer oor05213   Endometrial cancer oor05216   Thyroid cancer oor05218   Melanoma oor05219   Bladder cancer oor05226   Gastric cancer Brite KEGG Orthology (KO) [BR:oor00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     101288322 (CDH1)    04390 Hippo signaling pathway     101288322 (CDH1)    04371 Apelin signaling pathway     101288322 (CDH1)   09133 Signaling molecules and interaction    04514 Cell adhesion molecules     101288322 (CDH1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04520 Adherens junction     101288322 (CDH1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     101288322 (CDH1)   09162 Cancer: specific types    05226 Gastric cancer     101288322 (CDH1)    05216 Thyroid cancer     101288322 (CDH1)    05218 Melanoma     101288322 (CDH1)    05219 Bladder cancer     101288322 (CDH1)    05213 Endometrial cancer     101288322 (CDH1)   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     101288322 (CDH1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:oor03036]     101288322 (CDH1)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:oor04515]     101288322 (CDH1)    04090 CD molecules [BR:oor04090]     101288322 (CDH1) Chromosome and associated proteins [BR:oor03036]  Eukaryotic type   Centrosome formation proteins    Other centrosome associated proteins     101288322 (CDH1) Cell adhesion molecules [BR:oor04515]  Cadherins   Major cadherins    101288322 (CDH1) CD molecules [BR:oor04090]  Proteins   101288322 (CDH1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_pro CADH_Y-type_LIR TM_ErbB1 Motif Other DBs NCBI-GeneID:  101288322 NCBI-ProteinID:  XP_004273248 LinkDB All DBs Position 20:complement(17820203..17898902) Genome browser AA seq 885 aa AA seqDB search MGPPCRSLSALLLLLLLQVSSWLCQEPEPCNPGFGAESYTFTVPRLHLERGRVLGRVSFE GCTGLPKTVYVSDDTRFKVGTDGVVTVKRPLHLHHPEMSFLVHAWDSTRRKLSTKVTLKA VVHHHHHHHHHDSPSGTQTEVLTFPSSHHGLRRQKRDWVIPPISCPENEKGPFPKALVQI KSNREKETKVFYSITGQGADAPPLHVFIIERETGWLKVTEPLDREHIAKYILFSHAVSSD GQAIEEPMEIVITVTDQNDNKPEFTQEVFKGSVMEGALPGTSVMEVSATDADDDVNTYNA AIAYSILSQEPTLPHNKMFTINKDTGVISVLTTGLDRESFPMYTLVVQAADLQGEGLSTT ATAVITVNDTNDNPPIFDPTTYEGSVPENEANVVITTLTVTDADVPNTPAWEAVYTILND NEKQFVVITDPETNEGILKTAKGLDFEAKQQYILYVAVTNVAPFEVTLSTSTATVTVDVM DVNEAPIFMPPQKKVTVPEDFGLGLEITSYTAQEPDRFMEQKITYRIWRDAANWLEINPD TGAISTRAELDRENVEHVKNSTYTALIIATDDGSPPATGTGTLLLFLDDVNDNGPVPDPR SMDFCQRDPQPLIINIIDPDLPPNTSPFTAELTHGASVNWTIEYNDQEHESLLFKPRKTL EVGDYKINLKLIDNQNKDQVTTLDVHVCDCEGVVSNCRKAGPYAEAGLQVPAILGILGGI LAFLILILLILLLIRRRRVVKEPLLPPEEDTRDNIYYYDEEGGGEEDQEYDLSQLHRGLE ARPEVTRNDVAPTLLSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEG SGSEAASLSSLNSSESDQDQDYDYLNEWGGRFKKLADMYGGGEDD NT seq 2658 nt NT seq  +upstreamnt  +downstreamnt atgggccctccgtgccgcagcctctctgcgctcctgctgctgctgctgctgcaggtctca tcgtggctctgccaggagccggagccctgcaatcccggctttggcgccgagagctacacg ttcaccgtgccccggctgcacttggagagaggccgagtcctgggcagagtgagttttgaa ggatgcaccggtctaccaaagacagtctatgtttctgatgacacccgattcaaagtgggc acagatggcgtggttacagtcaaacggcctttacaccttcatcatccagagatgagtttt cttgtccatgcctgggactccacccgcaggaagctctccaccaaagtgaccctgaaggca gtagtgcaccaccatcaccaccaccatcatcatgactctccctctggaacccagacagaa gtgctcacatttcccagctcccaccatggtctcaggagacagaagagagactgggttatt cctcctatcagctgcccagaaaatgagaaaggcccatttcctaaggctctggttcagatc aaatctaacagggaaaaagaaaccaaagttttctacagcatcactggccaaggagccgac gcaccccctcttcatgtgtttattattgaaagagaaacaggatggctaaaggtgacggag cctctggatagagaacatattgccaagtacattctcttctctcatgccgtgtcttcagac gggcaagcaatcgaggagccgatggagattgtgatcaccgtgaccgatcagaatgacaac aagcctgagttcacccaggaggtcttcaaagggtctgtcatggagggcgctcttccaggg acctctgtgatggaggtctcggccacagacgcagacgatgatgtgaacacctacaacgct gccattgcttacagcatcctcagccaagagcctacgctgccgcacaacaaaatgttcacc atcaacaaggacacgggtgtcatcagtgtgctcaccaccgggctggaccgggagagtttt cccatgtataccctggtggttcaagctgcagacctgcaaggtgaaggcttaagcacgacc gcaacagctgtgatcacagtcaatgacaccaatgataaccctcccatcttcgacccaact acgtacgaggggtcggtgcctgagaacgaggctaacgtggtcatcaccacactcacagtg accgatgccgatgtccccaataccccagcgtgggaggccgtttacacgatattaaacgat aacgagaagcagtttgttgtcatcacagacccagaaaccaatgaaggcattttgaagacg gctaagggcttggattttgaggccaagcagcagtacatcctgtatgtggcagtgactaat gtggccccctttgaggtcactctctccacttccacagccaccgtcaccgtggacgtgatg gatgtgaatgaagcccccatcttcatgcctcctcagaagaaagtgacagtgcccgaggac ttcggcttgggcctggagatcacatcctacaccgcccaggagccagacagatttatggaa cagaagatcacgtatcggatttggagggatgctgccaactggctggagattaatccggac acgggtgccatttccactcgggctgagttggacagagagaacgtcgagcatgtgaagaac agcacgtacacggccctcattatagccactgacgatggttctccacctgctactggaaca ggaacgctgcttctattcctcgatgatgtgaatgacaatggccccgtaccagaccctcgg agcatggacttctgccagagggatccacagcctctcatcatcaacatcattgatcctgat cttccccccaacacttctcccttcacagcagaactaacacatggtgcaagtgtcaactgg accattgagtacaatgaccaagaacatgaatctctgctttttaagccaaggaaaacccta gaggtgggtgactacaaaatcaatctcaagctcatagacaaccagaacaaagaccaagtg accaccttagatgtgcacgtgtgtgactgtgaaggagtcgtcagcaactgtaggaaggcc gggccttatgccgaagcaggattgcaagttcccgccattctggggattcttggaggcatt cttgcttttctgatcctgattctgctgattctgctacttattcggaggagaagggtagtc aaagagcccttactgcccccagaagaggacacccgggacaacatttattactatgatgaa gaaggaggtggagaagaagaccaggagtatgacctgagccagctacacaggggcctggag gctcggcccgaagtgactcgcaatgatgtggcgccaaccctcctgagcgtgccccagtat cgaccccgacctgccaatcctgatgaaattggaaactttattgatgaaaacctgaaggca gctgatagtgaccccaccgccccaccctatgactctctgctggtgtttgattatgaagga agcggctctgaagctgctagtctgagctccctgaattcctcggagtcagaccaagaccag gattatgactacctgaacgaatggggcggtcgcttcaagaagctggcggacatgtatgga ggcggcgaggatgactag

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