KEGG   Orcinus orca (killer whale): 101288712
Entry
101288712         CDS       T05247                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
oor  Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:oor00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oor01009]
    101288712 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oor03036]
    101288712 (KDM5B)
Enzymes [BR:oor01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     101288712 (KDM5B)
Protein phosphatases and associated proteins [BR:oor01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101288712 (KDM5B)
Chromosome and associated proteins [BR:oor03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101288712 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN zf-PHD-like
Other DBs
NCBI-GeneID: 101288712
NCBI-ProteinID: XP_004285433
LinkDB
Position
1:complement(32477696..32555302)
AA seq 1539 aa
MEAPGPRPAPALGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVR
PPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKIPHVER
KILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILNPYNLF
LSGDSLRCLQKPNLTTDTKDKEYKPHDIPQRQSVQPLETCPPARRAKRMRAEAMNIKIEP
EETAEARTHNLRRRMGCPAPKCENEKDGKSSLKQEPAERKECITESEKEKPRSRAKKTTS
AVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQ
EAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEY
GADIASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLP
WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLETVMKRLAPELFISQ
PDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTV
DWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKAL
RETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCSC
PSYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEE
SEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSHNQLTVNELRQF
VSQLHALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSFEFDVELP
QLAEMRVRLEQAHWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELL
TVSEHWDDKARSLLKARPRHSLNSLATVVKEIEEIPAYLPNGAALKDSVQRARDWLQDVE
ALQAGGRVPVLDTLIELVTRGRSIPVHLNSLPRLESLVAEVHVWKECAANTFLTENSSYS
LLEVLCPRCDIGLLGLKRKQRKLKEPLPSGKKRSPRVESLSDLERALTESRETASAMATL
GEARLREMEALQSLRQANEGKLLSPVQDVEMKVCLCQKAPAAPMIQCELCRDAFHTGCVA
VPSIAQGPRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHR
ARQLLSSGNLQPTQERTGSGLLCGRRQAAAGQAPETSKLSQPPASTSFSLPGAWDSRTSY
LHSPFSAGRSCIPLHGLSPEVSELLMEAQLLQVSLPEIQELYQMLLAKPSPAQQADRSSP
ARPSSEKSDGCRGKRDGVSGLESKLKRRLEREGLSSERWDRVAKTRTPKKKRIKLSHRKD
TNSFKLERARGHELVPSADTQSLPADASCSEHEDSGDEDAVCPAVSCLQPEGDEVDWVQC
DGSCNRWFHQVCVGVCPETAEEEDYVCACCAAPGAPGRS
NT seq 4620 nt   +upstreamnt  +downstreamnt
atggaggcccccggcccgcgccccgcgccggccctcggcggccccggcccgctgggcgag
ttcctgccgccgcccgagtgcccggtcttcgagcccagctgggaggagttcgccgaccct
ttcgccttcatccacaagattcggcccatagccgagcagacaggaatctgcaaggtgcgg
ccgccgccggattggcagccaccatttgcatgtgatgttgacaaacttcattttacccca
cgtatccagaggctgaatgaattggaggctcaaactcgtgtaaaattaaatttcttggac
cagattgcaaagtactgggaattacagggaagtactctgaaaattccacatgtggagagg
aagatcttggacttgtttcagcttaataagttagttgcagaggaaggtggatttgcagtt
gtttgcaaggatagaaaatggaccaaaattgccaccaagatggggtttgctcctggcaaa
gctgtgggctcccatatcagagggcattatgagcgaattctcaacccctacaacttattc
ctgtctggagacagtttgaggtgtctgcagaagccaaacctgaccacagacacaaaggac
aaggagtacaaaccccatgatattccccagaggcagtctgtgcagcccttggaaacgtgt
cccccagctcgacgagcaaaacgcatgagagcggaggccatgaatattaaaatagaacca
gaagagacagcagaagccagaactcataacctgagacgtcgaatgggatgtccagctcca
aagtgtgaaaatgagaaagacgggaaaagcagcctcaagcaagaacctgctgagaggaag
gagtgtattacagagagcgagaaggagaaacccaggagtcgagcgaaaaaaaccaccagt
gctgttgacctgtatgtctgcctcttgtgtggcagtggcaacgatgaggaccggcttctc
ttgtgtgatgggtgtgatgacagttaccacaccttctgcctgatcccaccgctccatgat
gttcccaagggagactggaggtgtcctaagtgtttggctcaggagtgcagtaagccacaa
gaagcatttggctttgaacaggcagccagggactataccctccgtactttcggggaaatg
gcagatgcgttcaaatctgattacttcaacatgccagtccatatggttcccacagaactg
gttgagaaagaattttggcgactggtgagcactattgaagaggacgttaccgtggaatat
ggagctgatatcgcctcgaaggagttcggcagtggcttcccagtccgagacgggaaagtg
aagctctcgcctgaggaggaggaatatcttgacagtggctggaatttgaacaacatgcca
gtgatggagcagtctgtcctcgctcacatcaccgctgacatatgcggcatgaagcttcct
tggttgtacgtgggaatgtgcttttcttccttctgttggcatattgaagaccactggagc
tattccattaactacctgcactggggtgagccaaagacctggtatggagtcccagggtac
gctgccgagcagctggagaccgtgatgaaaaggctggccccggagctcttcatctcccag
cccgacctcctccaccagctcgtcaccatcatgaaccccaataccctgatgactcacgaa
gtgcctgtttaccgaactaatcagtgtgctggggagtttgtgatcacatttccaagagcc
taccacagcggtttcaatcaaggttttaattttgctgaggccgttaacttctgcactgtc
gattggctgcccttaggccgacagtgcgtagagcattaccgcctgctgcaccgctactgt
gtattttcccacgacgagatgatttgcaagatggcctccaaggcggacgtactagacgtt
gtagtggcatcaactgttcagaaagacatggccattatgattgaggatgagaaggctcta
agggaaactgttcgtaaattgggagtaattgattcagaaagaatggattttgagctgttg
ccagatgatgagcgtcagtgtgtaaaatgcaaaaccacatgcttcatgtctgccatctcc
tgttcttgtaaacctggcctgcttgtttgcctgcatcatgtaaaggaattatgttcctgt
ccttcttataaatataaactgcggtatagatacactctggatgatctctaccccatgatg
aatgcactgaagcttcgagcagaatcttacaacgaatgggccttgaatgtgaacgaagct
ttggaggcgaagattaataagaagaaaagcctcgtcagctttaaggctttgattgaggaa
tctgagatgaagaaattcccggacaacgatcttttacgtcacctccgcttggtgacacag
gacgcagagaaatgtgcctctgtcgcccagcagctgcttaacggcaagaggcagacgagg
tatcgatctggtggagggaaatcccacaatcagttgacagtgaatgagctccgacagttc
gtgagccagctgcatgccctgccctgtgtcctcagtcagacgccactgctgaaggatctc
ttgaatcgtgtagaagatttccaacagcatagccagaaattgctctctgaagagatgccc
agtgccgctgagctgcaagacttgctagacgtcagctttgaatttgatgtcgagcttccc
cagcttgctgagatgcgtgtccggctggagcaggcccattggctggaggaggtgcagcag
gcttgcctagaccccagctccctcaccttagatgatatgagacgtctcatagacctgggg
gtgggtctggccccatattcagctgtggagaaggctatggcacggcttcaagaactgctc
acggtatcagagcactgggatgacaaagccaggagtctcctcaaggccaggcctcggcat
tcattgaacagccttgctacggtggttaaggagatcgaggagatccccgcgtacctgccc
aatggtgcggctctgaaagactctgtgcagagagccagagactggcttcaggacgtagag
gccctgcaggctggaggacgtgtgccagtgttagacacactgatagaacttgttacacga
ggacgatctatcccggtgcatctgaattctttaccgagactggagtcactagtagctgag
gttcacgtttggaaagaatgtgctgctaatacattcctgactgagaattcgtcctattct
ctcttggaggtgctgtgtcctcgatgtgatattggccttttgggattgaagaggaagcag
agaaagttaaaggagcccttgccaagtggcaagaagagaagccccagagtagagagtctg
agtgacctggagagagctctgactgaaagcagagagactgcttcagctatggcaacgctt
ggggaagcccgcttacgagaaatggaagccttgcagtctctcagacaagccaatgagggg
aaattgctgtcgccagtccaggatgtggagatgaaggtctgcctgtgtcagaaggcccca
gctgcccccatgatccagtgtgaactctgcagggatgctttccacaccggctgtgtggca
gtacccagtattgcgcagggcccccggatctggctgtgtccccattgtcggaggtcagag
aaacctccattagagaaaattctgcccctgctggcctccctccagcgtatccgagttcgc
cttcctgagggagatgcgctgcggtatatgattgaaagaaccgtgaactggcagcacaga
gcccgacagctgctctcgtcaggtaacctccagcccacgcaggagcggacgggctcagga
ctgttatgtggcagacggcaggccgcagcaggacaggcgccagagacaagcaagctatct
cagcctcctgcctccacgtccttctccttgcccggtgcctgggacagcagaacctcatat
ttacactctcccttctctgctggacggagctgtatccccctccatggtctaagcccagaa
gtgagtgagctgttgatggaggcccagctgctccaggtgtcccttcctgaaattcaggag
ctctaccagatgctactcgcaaagcccagccctgcgcagcaagctgaccgcagctctcca
gcgagacccagcagtgagaagagtgacggctgccgtgggaagcgagacggagtcagcggc
ctcgagagcaaactgaagagacgcctggaaagagaaggtctctccagtgagcggtgggat
cgagtcgccaaaacgcggacccctaaaaagaagaggatcaaactgagccaccgcaaggac
acgaacagtttcaagttagagcgggcacgtggccatgagctggtcccttctgccgacact
cagtccctgcccgcagacgcgtcctgctcggagcacgaggactctggggacgaggacgcc
gtctgcccggccgtgagctgcctgcagccggagggagacgaggtggactgggtccagtgt
gatggcagctgcaatcggtggttccatcaggtctgtgttggcgtctgtcccgagacggcc
gaggaggaggactacgtgtgcgcgtgctgtgcggcgccgggcgcgccaggccggagctag

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